Gene BURPS1106A_A0489 details

Gene Information

• Locus tag: BURPS1106A_A0489
• Symbol: phnU
• ID: 4905993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 479427
• End bp: 480374
• Gene Length: 948 bp
• Protein Length: 315 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640143595
• Product: 2-aminoethylphosphonate ABC transporter, permease protein
• Protein accession: YP_001074531
• Protein GI: 126458245
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0555] ABC-type sulfate transport system, permease component
• TIGRFAM ID: [TIGR03226] 2-aminoethylphosphonate ABC transporter, permease protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.357372
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTCCT TATCTCACCT TGAGCCGCGG GCGGCGCTCG CCGCCGATCC CGCGGCCGCC 
GCCCGCATCC GCGCGTCGGC CGCCGCGCAC GACGCCGCCG CGCGTCGCCG CGAGCGGCGC 
GCGAGCGCAC GCATCGTCGC GCTCGCGGCC GTGGTGCTCG GCCCGCTCGT GCTGTATCCG 
CTCGTGCGGC TCGTGCTGCT GAGCGCGTTC GGCGCTCACG GCCCGACGCT CGCCGCATAC 
CGCGCCTTCT TCGCGAGCCA CGACGTGCGC GACGTGCTCG GCACGACGCT GTGGGTGCTG 
TTCGCGAGCG CGGGCACCGC GTCGATCGTC GGCGTGCTGC TCGCCGCGCT GCTGTTCTTC 
CGGCCGTTTC CGGGCGCGTC GCTCGTCACG CGCTTCCTGG AGCTGTACGT CGCGTTTCCG 
TCGTTTCTCG TCGCGTTCAC GCTGATTTTC CTGTACGGCT CGCAAGGCTC GGTCAGCATC 
GCGCTGCAGC GCGTCCTCGG CCTCGACGCG CCGCCGCTCG ATTTCCTGTT CGGCCCGGGC 
GGCGTGATCC TCGCGCAGAC CGTGTTCTAC ACGCCGTTCG TCGTGCGGCC GGCGCTCGCG 
TCGTTCGCCA CGCTCGATGC GCGGCTCGTC GAAGCCGCCG CCAGCCTCGG CGCGAACGGC 
TGGACGCTCG CGCGGCGCGT CGTGCTGCCG CTCGCGTGGC CGGGCATCGC GGCGGGCGTG 
ATTCTCTGCT TCCTGCTGAC GCTGAACGAA TTCGGCATCC TGCTCGTGCT CGGCAGCGCG 
CGGCTCGTCA CGCTGCCCGT GGCGATCTAC AGCAGCGCGA CCGTCGACAT CGACCTGCCG 
GCCGCGGCCG CGGGCGCGGT CGTGATGCTC GCGATGTCGC TCACGCTCTA TGCGCTGTAC 
CGGCGGATGA GCCGCCGCGC GAACGAAGGA GGGCGCGATG TCCGCTGA 

 

Protein sequence

MSSLSHLEPR AALAADPAAA ARIRASAAAH DAAARRRERR ASARIVALAA VVLGPLVLYP 
LVRLVLLSAF GAHGPTLAAY RAFFASHDVR DVLGTTLWVL FASAGTASIV GVLLAALLFF 
RPFPGASLVT RFLELYVAFP SFLVAFTLIF LYGSQGSVSI ALQRVLGLDA PPLDFLFGPG 
GVILAQTVFY TPFVVRPALA SFATLDARLV EAAASLGANG WTLARRVVLP LAWPGIAAGV 
ILCFLLTLNE FGILLVLGSA RLVTLPVAIY SSATVDIDLP AAAAGAVVML AMSLTLYALY 
RRMSRRANEG GRDVR