| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0316 |
|---|
| Symbol | |
|---|
| ID | 4906142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 300205 |
|---|
| End bp | 303396 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640143423 |
|---|
| Product | cation-transporting ATPase membrane protein |
|---|
| Protein accession | YP_001074359 |
|---|
| Protein GI | 126458583 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.707407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGATGA CCAAGCTGTT CGCTCCCGCC GCCCCGATCA CGACGACACT GCTCGTCGAA
GGCATGCATT GCGGCGGCTG TACGTCGCGC GTCGAGCAGG CGCTCGCCCA GGTGCCGGGC
GTGACCGGCG CGGTGGCGGA TCTCGCCGCG GGCACGGCGA CCGTCGCCGC GGCATCCGCC
ATCGACACGG CTCGCCTCGT CGCCGCGCTC GACGCGGCCG GCTATCGCGC GACGGTCGCG
ACGGCGCCCG CCGCGACCGG AAACGCGGAT GCGCGCCACG GCCGCGCGCG AGACGAGGAT
GACGATGCCG CCGCCGCGCC GCACACGGCG GCGGTCACGC TGACCATCGG CGGCATGACC
TGCGGCGGCT GCGCGCGGCG CGTCGAGCAG GCGCTCGCGG CCGTGCGCGG CGTGGCGGAT
GCGAAGGTGG ATCTCGCGAC GACGAGCGCG AAGGCAAGCG TCGCGCGCGA CGTCGACTCG
CAGACGCTCG TCGCGGCCGT CGAGCGAGCC GGGTATCGAG CGAACGTCGT GCGGGACGCG
CGCGCCGAAG CCGCGCCGAA GCCCGCCGCA TGCCCGTTCG AGGACGCGGC CCGTTCGGCC
GCGCCGGCCG CCGCGTTCGC GGTCGACGAA TCGAGCGCCG CGTCTCCGGA ACGCGTGGCG
ACGCAGTCGT TCGAACTCGA CATCGCGGGC ATGACCTGCG CGTCCTGCGT CGGCCGCGTC
GAAAAGGCGC TGGCGCAAGT GCCCGGCGTC GCCCGCGCGA CGGTCAATCT CGCCACCGAA
AAAGCCGCCG TCGATGCCGA TGCAGACGCC CACGTCGACA CCGCGCGGCT CATCGACGCG
GTGAAGCGAG CGGGCTATCG CGCGTCACCG GTGAGCGATC CGGCAAGCGC TCTCGCACCG
TCGCCGGAAA TCGCCGCCGC GCGCACGGCA ATCGAACTCG ACATCGCGGG CATGACCTGC
GCGTCCTGCG TCGGCCGCGT CGAGAAGGCG CTGGCGCAAG TGCCCGGCGT CGCCCGCGCG
ACGGTCAATC TCGCCACCGA AAAAGCCACC GTCGATGCCG ATGCGGACGC CCATGTCGAC
ACCGCGCGGC TCATCGACGC GGTGAAGCGG GCAGGCTATC GCGCGTCGCC GGCCATCGCG
GCTTGCGCCC CGGCATCCCG CGCAACCGCA ACCGCGGACG CGGCCGCCGC CCGCCCCGCC
TCGCCGAGCG CCGACGATCG CAAGCTCGCC GAAGCGCGCC GCGAGCGGGC GCTCGTGATC
GCGTCCGCGG TGCTGACCAC GCCGCTCGCC CTGCCGATGT TCGCCGCGCC GTTCGGCGTC
GACGCGGCGC TGCCCGCGTG GCTGCAGCTC GCGCTCGCGT CGATCGTGCA GTTCGGCTTC
GGCGCGCGCT TCTATCGCGC CGCATGGCAC GCGCTGAAGG CTCGCGCCGG CAACATGGAC
CTGCTCGTCG CGCTCGGCAC GTCGGCCGCG TACGGCCTGA GCATCTGGCT GATGCTGCGC
GACCCCGGCC ATGCCGCGCA CCTGTACTTC GAGGCGTCCG CCGTGATCGT CACGCTCGTG
CGCTTCGGCA AATGGCTCGA GGCGCGCGCG AAGCGGCAGA CCACCGACGC GATCCGCGCA
CTCAACGCAC TGCGCCCCGA TCGCGCGCGC ATCGTCGAGC ACGGCGTCGA GCGCGACGTG
CCGCTCGCGC AGGTGCGCGT CGGCACCGTC GTGCGCGTGC TGCCGGGCGA GCGCGTGCCC
GTCGACGGCC GGATCGAGGC GGGCGTCACG CATGTCGACG AATCGCTGAT CACGGGCGAG
AGCCTGCCCG TGCCGAAGGA GCCCGGCGAG CGCGTGACCG CCGGCTCGAT CAACGGCGAA
GGCGCGCTCA CCGTCGCGAC GACCGCGATC GGCGCCGAGA CGACGCTCGC GCGCATCATC
CGCCTCGTCG AATCCGCGCA GGCCGAAAAA GCGCCGATCC AGCGCCTCGT CGACCGCGTG
AGCGCCGTGT TCGTGCCCGC GATCGTCGCG ATCGCGTTCG CCACGTTCGC CGGCTGGCTC
GTCGCGGGCG CGGGCGTCGA GACGGCGATC CTCAACGCGG TCGCGGTGCT CGTGATCGCG
TGCCCGTGCG CGCTCGGCCT CGCGACGCCT GCCGCGATCA TGGCGGGCAC GGGCGTCGCC
GCGCGGCACG GCGTACTGAT CAAGGATGCG CAGGCGCTCG AGCTCGCGCA GCGCGCGCGC
ATCGTCGCGT TCGACAAAAC CGGCACGCTG ACGCAAGGCA GGCCGACCGT CACCGCGTTC
GACGCGATCG GCATTCCGCG TGGCGATGCA CTCGCGCTCG CCGCCGCCGT CCAGCGCGCG
AGCGCGCATC CGCTCGCGCG CGCGGTCGTC GCCGCGTTCG ACGCCGATGC CGACGCGCGC
CGCTCGTCCC TCGCCGCCGC GCACGCCGAT ACGCCGCGCG CGGTCGCGGG TCGCGGCGTC
GAGGCGCGCG TCGACGCTCG CCTGCTCGCG CTCGGCAGCA CGCGCTGGCG CGATGAACTC
GGCATCGCCG TGCCCGACGG CGTCGCGCGC CGCGCGGCAG CGCTCGAAGC GGCGGGCAAC
ACGGTATCGT GGCTGATGCG CGCCGACGCG CCGCGCGAGG CGCTCGCACT CGTCGCGTTC
GGTGACACGG TCAAGCCGAA CGCGCGGCGC GCGATCGAGC GGCTCGCCGC GCGCGGCATC
AGGAGCGCGC TCGTGACGGG CGACAACCGC GGCAGCGCGA CGGCCGTCGC CGCGTCGCTC
GGCATCGACG AAGTGCACGC GCAGGTGCTG CCGGACGACA AGGCGCGCGT CGTCGCGCAA
TTGAAGGCGA CGGCGGGCGA CGGCGCGGTC GCGATGGTCG GCGACGGCAT CAACGATGCG
CCCGCGCTCG CCGCGGCCGA CGTCGGCATC GCGATGGCGA CGGGCACCGA CGTCGCGATG
CACACCGCCG GCATCACGCT GATGCGCGGC GATCCGGCGC TCGTCGCGGA CGCGGTCGAC
ATCTCGCGCC GCACGTACCG GAAGATTCAG CAGAACCTGT TCTGGGCGTT CGTCTACAAC
CTGGTGGGGA TTCCGCTCGC GGCGCTCGGC TGGCTGAACC CGATGATCGC GGGCGCGGCG
ATGGCGTTCT CCAGCGTGAG CGTCGTGACG AACGCACTGT TGCTGCGGCG CTGGAAGGGC
GACGCGCGCT AA
|
|---|
| Protein sequence | MQMTKLFAPA APITTTLLVE GMHCGGCTSR VEQALAQVPG VTGAVADLAA GTATVAAASA
IDTARLVAAL DAAGYRATVA TAPAATGNAD ARHGRARDED DDAAAAPHTA AVTLTIGGMT
CGGCARRVEQ ALAAVRGVAD AKVDLATTSA KASVARDVDS QTLVAAVERA GYRANVVRDA
RAEAAPKPAA CPFEDAARSA APAAAFAVDE SSAASPERVA TQSFELDIAG MTCASCVGRV
EKALAQVPGV ARATVNLATE KAAVDADADA HVDTARLIDA VKRAGYRASP VSDPASALAP
SPEIAAARTA IELDIAGMTC ASCVGRVEKA LAQVPGVARA TVNLATEKAT VDADADAHVD
TARLIDAVKR AGYRASPAIA ACAPASRATA TADAAAARPA SPSADDRKLA EARRERALVI
ASAVLTTPLA LPMFAAPFGV DAALPAWLQL ALASIVQFGF GARFYRAAWH ALKARAGNMD
LLVALGTSAA YGLSIWLMLR DPGHAAHLYF EASAVIVTLV RFGKWLEARA KRQTTDAIRA
LNALRPDRAR IVEHGVERDV PLAQVRVGTV VRVLPGERVP VDGRIEAGVT HVDESLITGE
SLPVPKEPGE RVTAGSINGE GALTVATTAI GAETTLARII RLVESAQAEK APIQRLVDRV
SAVFVPAIVA IAFATFAGWL VAGAGVETAI LNAVAVLVIA CPCALGLATP AAIMAGTGVA
ARHGVLIKDA QALELAQRAR IVAFDKTGTL TQGRPTVTAF DAIGIPRGDA LALAAAVQRA
SAHPLARAVV AAFDADADAR RSSLAAAHAD TPRAVAGRGV EARVDARLLA LGSTRWRDEL
GIAVPDGVAR RAAALEAAGN TVSWLMRADA PREALALVAF GDTVKPNARR AIERLAARGI
RSALVTGDNR GSATAVAASL GIDEVHAQVL PDDKARVVAQ LKATAGDGAV AMVGDGINDA
PALAAADVGI AMATGTDVAM HTAGITLMRG DPALVADAVD ISRRTYRKIQ QNLFWAFVYN
LVGIPLAALG WLNPMIAGAA MAFSSVSVVT NALLLRRWKG DAR
|
|---|
| |