| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0288 |
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| Symbol | prpB |
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| ID | 4903568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 278253 |
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| End bp | 279146 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640143395 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001074331 |
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| Protein GI | 126456786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.804341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAACC CACAACTGAT CAGCGCCGGC GCGAAATTCC GCGCGGCGGT CGCGGCCGAG
CAGCCGCTGC AGGTGGTCGG CGCGATCACC GCGTACGCCG CGAAGATGGC CGAGGCGGTC
GGCTTCAAGG CGGTCTATCT GTCGGGCGGC GGCGTCGCCG CGAACTCGCT CGGCATCCCC
GATCTCGGCA TCAGCACGAT GGACGACGTG CTCGTCGACG CGAACCGGAT CACGAACGCG
ACGAACCTGC CGCTGCTCGT CGACATCGAT ACCGGCTGGG GCGGCGCGTT CAACATCGCG
CGCACGATCC GCTCGTTCAT CAAGGCGGGC GTGGGCGCCG TGCACCTCGA GGACCAGGTC
GGCCAGAAGC GCTGCGGCCA CCGCCCGGGC AAGGAATGCG TGCCGGCGGG CGAGATGGTC
GACCGGATCA AGGCGGCCGT CGACGCGCGC ACCGACGAAA CCTTCGTGAT CATGGCGCGC
ACCGACGCCG CGGCGGCCGA GGGCATCGAC GCGGCGATCG AGCGCGCGAT CGCGTACGTC
GAGGCGGGCG CGGACATGAT CTTCCCCGAG GCGATGAAGA CGCTCGACGA CTACCGCCGC
TTCAAGGAGG CGGTGAAGGT GCCGATCCTC GCGAACCTGA CCGAGTTCGG CTCGACGCCG
CTGTTCACGC TCGACGAGCT GAAGGGCGCG AACGTCGACA TCGCGCTCTA CTGCTGCGGC
GCGTACCGCG CGATGAACAA GGCCGCGCTG AACTTCTACG AAACGGTGCG CCGCGACGGC
ACGCAAAAGG CCGCGGTGCC GACGATGCAA ACGCGCGCGC AATTATACGA TTATCTCGGC
TACTACGCGT ACGAAGAGAA GCTGGACCAG CTTTTCAACC AAGGCCGCAA CTGA
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| Protein sequence | MGNPQLISAG AKFRAAVAAE QPLQVVGAIT AYAAKMAEAV GFKAVYLSGG GVAANSLGIP
DLGISTMDDV LVDANRITNA TNLPLLVDID TGWGGAFNIA RTIRSFIKAG VGAVHLEDQV
GQKRCGHRPG KECVPAGEMV DRIKAAVDAR TDETFVIMAR TDAAAAEGID AAIERAIAYV
EAGADMIFPE AMKTLDDYRR FKEAVKVPIL ANLTEFGSTP LFTLDELKGA NVDIALYCCG
AYRAMNKAAL NFYETVRRDG TQKAAVPTMQ TRAQLYDYLG YYAYEEKLDQ LFNQGRN
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