Gene BURPS1106A_A0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0148 
Symbol 
ID4906207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp137434 
End bp138504 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content67% 
IMG OID640143255 
ProductImpA-related N-terminal family protein 
Protein accessionYP_001074191 
Protein GI126456359 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03363] type VI secretion-associated protein, ImpA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00537792 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCA CCCCACCCGC CGCCGCGCTG CGCTATGCGG ATCTTCTCGA GCCCGTCTCG 
CCGGACGCAC CCTGCGGGCC GGACCTCGAA TACGATCCGG CGTTCGTGAT GCTGCAATCC
GCGATCGCGC CGAGGAAAGA TGCGCAATAT GGCGAGTTCG TCGAAGCGCC TCAGCCCGCG
AACTGGGCGG AGGCCGAACG CGATTGCCTC GCGCTGCTGC TGCGCACGAA AGACATCCGG
CTCGTCGTGA TCCTGATGCG ATGCCGAATC CGCCAGAGCG GCGCGGAGGG CCTGCGCGAC
GGCCTCACGC TGCTCAACGA GTTGCTCGCA CGCTACGGTG AGGCACTGCA CCCCGTACCG
TTCTTCGAAG GCGAACGCGA TCCCGTGGTC TATGCGAATG CGATCGCCAC GCTGGCGGAC
CCCGATGCGA CGCTCGCGGA TATTCGGGAA ATCCCGTTGC CCAAGGCGAG CGGCCTGCAA
TTGCAGTTGC GCGACATCGA AAAGGCGCTC GCGGTGACGC GCGTGAAAGA CGCACTCGCG
CCCGAATCGG CCAGCCGGCT GCTGAAGGAA TGGTGGAATC GGCGCGACAA GACGATCGCG
GCGCTCGCGC AAGCCCAGCG CATCGTGGCC GATCTGATCG CGTCGACCCG CGAGTCGCTC
GGCGACGACG CGCCCGACCT GTCCGGCATC GCGAAACTGC TGCATCCGTT TGCGCAAGCG
CAACTGGAAT CGCCGTATTC GGCAAACGCC GCTCAACCGC AAGGCGACGC GAAGCCGGCG
ACCGGCGACG CCGCGCATGC GCGCGCCGCC GATACGTCCG CCCAGGCAGG CGATACCGAC
ACGCAAGCGC CCGCTGCGAT GCCGATCGCG CCTGCCCAAC CGCCGATGGA TCGCTGGGGC
GCGCTGGCGG CCATTCAGGC GACGCGCCTT TGGTTCGAGC AGAACGAGCC GAGCAGCCCG
GTGATCGTGC TGCTGCGCCA GTCGGAGCGG ATGGTCGGCA AGCGCTTTTC GGAAATCGCC
AATGCGATTC CCGCCGAACT GCTCGCGCAA TGGGATGCGA TCGACGTCTA G
 
Protein sequence
MNATPPAAAL RYADLLEPVS PDAPCGPDLE YDPAFVMLQS AIAPRKDAQY GEFVEAPQPA 
NWAEAERDCL ALLLRTKDIR LVVILMRCRI RQSGAEGLRD GLTLLNELLA RYGEALHPVP
FFEGERDPVV YANAIATLAD PDATLADIRE IPLPKASGLQ LQLRDIEKAL AVTRVKDALA
PESASRLLKE WWNRRDKTIA ALAQAQRIVA DLIASTRESL GDDAPDLSGI AKLLHPFAQA
QLESPYSANA AQPQGDAKPA TGDAAHARAA DTSAQAGDTD TQAPAAMPIA PAQPPMDRWG
ALAAIQATRL WFEQNEPSSP VIVLLRQSER MVGKRFSEIA NAIPAELLAQ WDAIDV