| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0057 |
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| Symbol | pcaD |
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| ID | 4905106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 45624 |
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| End bp | 46409 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640143164 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | YP_001074100 |
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| Protein GI | 126458130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0184524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTCG CTTCAGTCGA TGGAGTGCGA CTGCATTACC GGATCGATCG CGCGGCGCGC
GCCGACGCGC CGTGGCTCGT GTTCTCGAAC TCGCTCGGCG CGGACCTGTC GATGTGGGCG
CCGCAGATCG GCCCGATGAC CGCGCACTTC AATCTGCTGC GCTACGACAC GCGCGGTCAC
GGCCACTCGG ACGCGCCGGC CGGCTCGTAC ACGATCGAGC AACTGGCGGG CGACGTGATC
GGCCTTCTCG ATCACGTCGG TGTCGCGCGC GCGCATTTCT GCGGCATCTC GATGGGCGGC
CTGACGGGCG CGGCGCTCGC CGCGCGTCAC GCGAAGCGCG TCGATCGCGT GGTGCTGTCG
AACACGTCGG CGAAAATCGG CTCGCCGGAA ATATGGGCGC CGCGTGCACG CAAGGCGCGC
GCCGAAGGGA TGGCGGCGCT CGCCGACGCG GTGCTGCCCC GCTGGTTCAC GGCCGCGTTC
TTCGAGCGCG AGCCGCGCCT CATCGACGTG ATTCGCGATA CGTTCAATCA CACGGACAAG
GACGGCTATG CGGCGAACTG CGATGCGTTG AACGCCGCCG ATCTGCGTGA CGAGGCGAAA
GGCATCGCGG TGCCGACGCT CGTGGTGACG GGCGCGCACG ACCTTTCGAC GCCGCCGGAA
CAGGGCCGCG CGCTTGCCGC GTCGATCGCG GGCGCGAAGC ATGTCGAATT CGATTGCGCG
CACATCTCGA ACATCGAATG TGCGGACGGC TTCAATCGCA CGCTGATCGA TTTCCTGACG
GCCTGA
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| Protein sequence | MPFASVDGVR LHYRIDRAAR ADAPWLVFSN SLGADLSMWA PQIGPMTAHF NLLRYDTRGH
GHSDAPAGSY TIEQLAGDVI GLLDHVGVAR AHFCGISMGG LTGAALAARH AKRVDRVVLS
NTSAKIGSPE IWAPRARKAR AEGMAALADA VLPRWFTAAF FEREPRLIDV IRDTFNHTDK
DGYAANCDAL NAADLRDEAK GIAVPTLVVT GAHDLSTPPE QGRALAASIA GAKHVEFDCA
HISNIECADG FNRTLIDFLT A
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