| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0056 |
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| Symbol | pcaB |
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| ID | 4904948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 44253 |
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| End bp | 45611 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640143163 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_001074099 |
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| Protein GI | 126456258 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0457569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAAG ACAGTGCCCG TCTGACCGCT CTCGTTTGCG GAAGCGAACC GCTCAACCGG
ATCTGGTCGC CGCATGCGAC GTTGCAGCGG ATGCTCGACG TCGAAGCGGC GCTCGCGCGC
GCGCTCGCCG CGAATGGCGT GATTCCGGCG AACGCGGTGC GGCCGATCGA GGCGGCCTGC
GCGGCGAGCG AGCTCGACGC GCAGGCGCTG ATGCGCGAGG CGGCGCTCGG CGGCAATCTC
GCGATTCCGC TCGTCAGGCA ATTGACCGCA CGCGTGAAGG TGCGCGACGC CGAAGCGGCG
AAGTACGTGC ACTGGGGCGC GACGAGCCAG GACATCATCG ATACCGCCGC CGTGCTGCAA
CTGCGCGACA CGCTCGACTG GCTCGATCCG CTGCTGCGCG ACACGTGCAC GGCGCTCGCG
ACGCTCGCGG CCGCGCACCG CACGACACCG ATGATCGGTC GCACGTGGCT GCAGCAGGCG
CTGCCGATCA CGCTCGGATT GAAGTTCGCG CAATGGCTCG ACGCGCTGCT GCGCCACCGC
GAGCGTATCG TCGCGTTGCG CGAGCGCGCG CTCGCATTGC AGTTCGGCGG CGCGGCGGGC
ACGCTCGCGA GCTTGCGCGA CGCGGCGCCC GCGGTTGCGC GCTCGCTCGC CGACGACCTT
CGGCTCGCGC TGCCGGCCGT GCCGTGGCAC ACGCAGCGCG ACCGGATCGC CGAGACGGCG
GCTTGCTTCG GGATGCTGAT CGGCACGCTC GGCAAGATCG CGCGCGACAT TTCGCTGTCG
ATGCAAACGG AGATCGGCGA GCTCGCGGAG CCCGCCGCGG CGGGCAAGGG CGGCTCGTCG
ACGATGCCGC ACAAGCGCAA TCCGGTCGGC TGCGCGGCCG TGCTGACCGC GGCCGTGCGC
GCGCCCGGGC TCGTGTCGAC CGTGCTCGCC GGCATGGTCC AGGAACACGA GCGCGCGCTC
GGCGGCTGGC AGGCCGAGTG GGACGCGCTG CCCGAACTCG CGCGGCTCGC GGGCGGCGCG
CTCGCGCAGG TCGCGCAGAT CGTCGAGGGA TTGAACGTCG ACGTCGCGCG CCTTGCCGAC
AATCTCGACG CGACGCGCGG CCTCGTGCTC GGCGAGGCGG TGATGCTCGC GCTCGGCGAC
AGGATCGGCC GGCTCGACGC GCATCATCTC GTCGAGCGCG CCTCGAAGCA AGCCGTGCGC
AGCGGCCGCC CGCTGTACGA CGTGCTGGCC GCGGATCCCG ACGTCGCCGC GCACCTCACG
CCGCAGGCGT TGCGGCAGTT GCTCGATCCC GCTCATTACG TCGGCGAGGC GCACGCCTAT
GTCGACGCCG TGCTCGCGCT CCACGCGAGC CGCCATTAA
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| Protein sequence | MLEDSARLTA LVCGSEPLNR IWSPHATLQR MLDVEAALAR ALAANGVIPA NAVRPIEAAC
AASELDAQAL MREAALGGNL AIPLVRQLTA RVKVRDAEAA KYVHWGATSQ DIIDTAAVLQ
LRDTLDWLDP LLRDTCTALA TLAAAHRTTP MIGRTWLQQA LPITLGLKFA QWLDALLRHR
ERIVALRERA LALQFGGAAG TLASLRDAAP AVARSLADDL RLALPAVPWH TQRDRIAETA
ACFGMLIGTL GKIARDISLS MQTEIGELAE PAAAGKGGSS TMPHKRNPVG CAAVLTAAVR
APGLVSTVLA GMVQEHERAL GGWQAEWDAL PELARLAGGA LAQVAQIVEG LNVDVARLAD
NLDATRGLVL GEAVMLALGD RIGRLDAHHL VERASKQAVR SGRPLYDVLA ADPDVAAHLT
PQALRQLLDP AHYVGEAHAY VDAVLALHAS RH
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