Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0021 |
Symbol | bdhA |
ID | 4905784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 16259 |
End bp | 17044 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640143128 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001074064 |
Protein GI | 126456972 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATC TGAATGGCAA AACCGCCATC GTGACGGGCG CGGCGAGCGG CATCGGCAAG GAAATCGCGC TGGAGCTCGC GCGCGCGGGC GCGGCGGTGG CGATCGCCGA TCTGAACCAG GACGGCGCGA ACGCGGTGGC CGAGCTCATC GAGCAGGCGG GCGGCCGGGC AATCGGCGTG GCGATGGACG TGACGAACGA GGACGCGGTG AACGCCGGCA TCGACAAGGT CGCCGAGACG TTCGGCTCGG TCGACATTCT CGTGTCGAAC GCGGGCATCC AGATCGTCAA TCCGATCGAG AACTATGCGT TCGCCGACTG GAAGAAGATG CAGGCGATTC ACGTCGACGG CGCGTTCCTG ACGACGAAGG CCGCGCTCAA GCACATGTAC AAGGACGATC GCGGCGGAGT GGTGATCTAC ATGGGCTCGG TGCATTCGCA CGAGGCGTCG CCGCTGAAGT CGGCGTACGT GACGGCCAAG CACGGGCTGC TGGGGCTTGC GCGCGTGCTG GCGAAGGAAG GCGCGAAGCA CAACGTGCGC TCGCATGTGG TGTGCCCGGG CTTCGTGCGC ACGCCGCTCG TCGACAAGCA GATTCCGGAG CAGGCCAAGG AGCTCGGCAT CAGCGAAGAG GAGGTGGTGA AGAAGGTGAT GCTCGGCCAG ACGGTGGACG GCGTGTTCAC GACGGTCGAG GACGTCGCGA AGACGGTGCT GTTCCTGTCC GCGTTCCCGA GCGCGGCGCT CACCGGCCAG TCGTTCGTCG TCAGCCACGG CTGGTTCATG CAATGA
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Protein sequence | MSNLNGKTAI VTGAASGIGK EIALELARAG AAVAIADLNQ DGANAVAELI EQAGGRAIGV AMDVTNEDAV NAGIDKVAET FGSVDILVSN AGIQIVNPIE NYAFADWKKM QAIHVDGAFL TTKAALKHMY KDDRGGVVIY MGSVHSHEAS PLKSAYVTAK HGLLGLARVL AKEGAKHNVR SHVVCPGFVR TPLVDKQIPE QAKELGISEE EVVKKVMLGQ TVDGVFTTVE DVAKTVLFLS AFPSAALTGQ SFVVSHGWFM Q
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