Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_4042 |
Symbol | atpD |
ID | 4901079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3948549 |
End bp | 3949943 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640137268 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001068261 |
Protein GI | 126455115 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTG CTGCTTTGGT AGAAGGCAAG ATCGTACAGT GCATCGGCGC CGTTATCGAC GTGGAATTCC CGCGCGAGAG CATGCCGAAG ATCTACGACG CGCTCATTCT GGAAGGCTCG GAACTGACGC TCGAAGTCCA GCAGCAGCTG GGCGACGGCG TGGTCCGTAC CATCTGTCTG GGTGCCTCCG ACGGCCTGCG CCGCGGCGTC GTGGTGAAGA ATACGGGCAA TCCGATTTCG GTGCCGGTCG GCAAGCCGAC CCTCGGCCGC ATCATGGACG TGCTCGGCCG CCCGATCGAC GAGGCGGGAC CGATCGAGAG CGAAAACAAG CGCTCGATCC ACCAGAAGGC GCCGGCGTTC GACGAGCTGT CGCCGTCGAC CGAACTGCTC GAAACGGGTA TCAAGGTCAT CGATCTGATC TGCCCGTTCG CAAAGGGCGG CAAGGTCGGC CTGTTCGGCG GCGCGGGCGT GGGCAAGACC GTCAACATGA TGGAGCTCAT CAACAACATC GCGAAGGAGC ACGGCGGTTA CTCCGTGTTC GCGGGCGTGG GCGAGCGTAC CCGTGAAGGG AACGACTTCT ACCACGAAAT GAAGGACTCG AACGTTCTCG ACAAGGTCGC GCTGGTGTAC GGCCAGATGA ACGAGCCGCC GGGCAACCGT CTGCGCGTCG CGCTGACGGG CCTCACGATG GCCGAGCACT TCCGTGACGA AGGCCTCGAC GTGCTGTTCT TCGTCGACAA CATCTACCGT TTCACGCTGG CCGGTACCGA AGTGTCGGCG CTGCTCGGCC GTATGCCGTC GGCAGTGGGC TATCAGCCGA CGCTGGCTGA AGAAATGGGC AAGCTGCAAG AGCGCATCAC GTCGACGAAG AAAGGCTCGA TCACGTCGGT TCAGGCCGTG TACGTGCCTG CGGACGACTT GACCGACCCG TCGCCGGCCA CCACCTTCGG CCACTTGGAC GCAACCGTCG TTCTGTCGCG TGACATCGCA TCGCTCGGTA TCTATCCGGC CGTCGACCCG CTCGACTCGA CGTCGCGCCA GATCGACCCG AACGTGATCG GCGAAGAGCA CTACTCGATC ACCCGCCGCG TTCAGCAGAC GCTGCAGCGC TACAAGGAAC TGCGCGACAT CATCGCGATT CTGGGCATGG ACGAGCTGTC GCCGGAAGAC AAGCTGTCGG TTGCGCGCGC ACGTAAGATC CAGCGTTTCC TGTCGCAGCC GTTCCACGTC GCCGAAGTGT TCACGGGCTC GCCGGGCAAG TACGTGCCCC TGAAGGAAAC GATCCGCGGC TTCAAGATGA TCGTCGACGG CGAGTGCGAC CACCTGCCGG AACAGGCGTT CTACATGGTC GGCACGATCG ACGAAGCCTT CGAGAAGGCC AAGAAGATCC AGTAA
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Protein sequence | MSTAALVEGK IVQCIGAVID VEFPRESMPK IYDALILEGS ELTLEVQQQL GDGVVRTICL GASDGLRRGV VVKNTGNPIS VPVGKPTLGR IMDVLGRPID EAGPIESENK RSIHQKAPAF DELSPSTELL ETGIKVIDLI CPFAKGGKVG LFGGAGVGKT VNMMELINNI AKEHGGYSVF AGVGERTREG NDFYHEMKDS NVLDKVALVY GQMNEPPGNR LRVALTGLTM AEHFRDEGLD VLFFVDNIYR FTLAGTEVSA LLGRMPSAVG YQPTLAEEMG KLQERITSTK KGSITSVQAV YVPADDLTDP SPATTFGHLD ATVVLSRDIA SLGIYPAVDP LDSTSRQIDP NVIGEEHYSI TRRVQQTLQR YKELRDIIAI LGMDELSPED KLSVARARKI QRFLSQPFHV AEVFTGSPGK YVPLKETIRG FKMIVDGECD HLPEQAFYMV GTIDEAFEKA KKIQ
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