Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_4036 |
Symbol | hemE |
ID | 4901338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3942705 |
End bp | 3943799 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640137262 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001068255 |
Protein GI | 126451836 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.617261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCCAGA CTCTCCTCAA CGACACCTTC CTGCGCGCGC TGCTGCGCGA GCCGACCGAC TACACGCCGA TCTGGCTGAT GCGCCAGGCG GGCCGCTACC TGCCCGAGTA CAACGCAACG CGCGCGCGCG CGGGCAGCTT CCTCGGGCTC GCGAAGCAGC CCGATTACGC GACCGAAGTG ACGCTGCAGC CGCTCGAGCG CTTTCCGCTC GACGCCGCGA TCCTGTTCTC CGACATCCTG ACGATTCCCG ACGCGATGGG GCTGGGCCTC GATTTCGCCG CGGGCGAGGG GCCGAAGTTC GCGCATCCGG TGCGCACCGA GGCCGACGTC GCGAAGCTCG CGGTGCCGGA CATCGGCGCG ACGCTCGGCT ACGTGACCGA CGCGGTGCGC GAGATTCGCC GCGCGCTCAC CGACGGCGAA GGCCGCCAGC GCGTGCCGCT GATCGGCTTC TCCGGCAGCC CGTGGACGCT CGCGTGCTAC ATGGTCGAAG GCGGCGGCTC GGACGATTTC CGCACCGTGA AATCGATGGC GTACGCGCGG CCCGACCTGA TGCACCGGAT TCTCGACATC AATGCGCAGG CAGTGGCCGC GTATCTGAAC GCGCAGATCG AAGCCGGCGC GCAGGCGGTG ATGATCTTCG ATACGTGGGG CGGCGCGCTC GCCGACGGCG CCTATCAGCG CTTCTCGCTC GACTACGTCC GACGCGTGCT CGCGCAGCTC AAGCGCGAGC ACGACGGCGC GCGCGTGCCG GCGATCGCGT TCACGAAGGG CGGCGGGCTC TGGCTCGAGG AGCTCGCGGC GACGGGCGTC GATGCGGTCG GCCTCGACTG GACGGTCAAC CTCGGCCGCG CGCGCGAGCG CGTCGCGGGG CGCGTCGCGC TGCAGGGCAA TCTCGATCCG ACGATCCTGT TCGCGCCGCC CGAGGCGATC CGCGCCGAGG CGCGCGCGGT GCTCGACAGC TACGGTAACC ATCCGGGCCA TGTGTTCAAC CTCGGCCACG GCATCTCGCA GTTCACGCCG CCCGAGCATG TCGCTGAACT CGTCGACGAA GTGCATCGTC ATAGCCGCGC GATTCGTAGC GGCGCCGGAT CGTGA
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Protein sequence | MAQTLLNDTF LRALLREPTD YTPIWLMRQA GRYLPEYNAT RARAGSFLGL AKQPDYATEV TLQPLERFPL DAAILFSDIL TIPDAMGLGL DFAAGEGPKF AHPVRTEADV AKLAVPDIGA TLGYVTDAVR EIRRALTDGE GRQRVPLIGF SGSPWTLACY MVEGGGSDDF RTVKSMAYAR PDLMHRILDI NAQAVAAYLN AQIEAGAQAV MIFDTWGGAL ADGAYQRFSL DYVRRVLAQL KREHDGARVP AIAFTKGGGL WLEELAATGV DAVGLDWTVN LGRARERVAG RVALQGNLDP TILFAPPEAI RAEARAVLDS YGNHPGHVFN LGHGISQFTP PEHVAELVDE VHRHSRAIRS GAGS
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