| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3986 |
|---|
| Symbol | |
|---|
| ID | 4900593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3888174 |
|---|
| End bp | 3888692 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640137212 |
|---|
| Product | phage integrase family site specific recombinase |
|---|
| Protein accession | YP_001068206 |
|---|
| Protein GI | 126452367 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTCTCG CGGCCGGGGC GGTCGCCCGA CAGCCGCATC TTCGAAACTT CGTGCGACTC
GCCTTGAGCA CGGGGTGTAG GAAAAACGAG CTGCTCGCGC TCGAGTGGCA CCGGGTCGAT
TTCGAGCGTT CACTTTTTCG ACTCGAGTGC GAGCACACGA AGAACGGTAA GCGTCGATTG
GTGCCGCTCA ACAGTGGCGC GTTGTTGGCG CTGAGGGATC AGCGTGATTG GGTAGCGCGA
CATTGCGCCG GGTCTGAGTG GGTGTTTGCC TCCAGCTCGG GGAGGCGAGT CGGCAACCTG
CAAAAAGGAT TCGTCGCGGC ATGTGCTCGC GCCGGAATCG AAAATTTCCG CATCCACGAT
CTGCGCCACA CCTTCGCATC ATGGCTCGTC ATGGAGGGCG TTTCCCTGTA CGTCGTCAAG
GACCTGTTGG GACATTCCTC CATCACGGTC GCTGAGCGCT ATGCGCATCT GTCCCCTGAT
CACGGTCGCG AGGCCGTGCA GAAACTCTTG CCGCTCTAA
|
|---|
| Protein sequence | MILAAGAVAR QPHLRNFVRL ALSTGCRKNE LLALEWHRVD FERSLFRLEC EHTKNGKRRL
VPLNSGALLA LRDQRDWVAR HCAGSEWVFA SSSGRRVGNL QKGFVAACAR AGIENFRIHD
LRHTFASWLV MEGVSLYVVK DLLGHSSITV AERYAHLSPD HGREAVQKLL PL
|
|---|
| |