| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3955 |
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| Symbol | |
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| ID | 4902140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3859496 |
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| End bp | 3861826 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640137181 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001068175 |
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| Protein GI | 126452788 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAT CGACGACGTC CGACACCCTG ACGCCCGAGC AACAGTTCGA GGAGGACATC
GCGCTCGTCC TCAAGAACGC GATCGAGCTG CATCACCAAG GTGATTTCGA GAACGCGCGC
GCGCTCTACG AGGCGATCGT CGACGCGAAG CCGGACCACG CCGACGCCCA ATACGACCTC
GGCGTGTTAA AGGTCCAGAT CGGCCGGGCC GCCGACGCGC TGCCGCACTT CGAGATCGCG
CTCGGCGGCG CGCCGAACAA CGGCCAGTAC TGGGTCAGCT ATGTGAACGC GCTGATCGAT
GCCGGCCAGA TCGCGGCGGC ATGGACCGCG CTCGGGCTCT GCCAGCAGCG CGGCGTGCGC
GGCCCGGCCG TCGACGGGCT GATCCTGCGG CTCGCGCATT CGGAGGAAGG CAAACCGGCC
TATATCGGCA CGGCGGCCGC GGCACCGGAA GCCGCGGCGC CGGCCGATGC CGCGGAGAAC
GCCGCGGAGC CCGCGCGCGC CGACGCGCGC AAGCCGTCCG AGCAGGATGT CCGGCGCTTC
GCGACGCTCT ACAACAAGCG GCGCATGGCG GAGGCGATCA AGTTCGCGCG CGCGCTCGCC
CAGCGCTATC CGGGCAGCGG CGTCGCCTGG AAATCGCTCG GCTTCGCGCT CCATCGCGAC
GGCCAGTACG GGCCGGCCTG CGAAGCGCTG ACCAAGGGCG CGGCGATGCT GCCCGACGAT
GCCGAATGCA ACACGCTCTA TGCGGACACG CTGCGCGTGC TGAACCGGCT CGCCGACGCC
GAAGCTCAGG TGCGGCGCGT GCTCGACGGC ACGCCCGATT ATGCTGAAGC GCATCGCGTG
CTGAACATGA CGCTGAGCGC GCGCGGCCGC TACCAGGAAG CGATCGAGGC CGGCCGGCGC
TCGGTCGAGC TCGCGCCGAA CTCGGTGAAC GCGCACGGCT CGCTCGCGGT GACCCTCAGC
GACTACGGGC AGACCGACGA AGCCGAAATC CATTTCCGCC GCGCGCACGA ACTCAATCCG
AAGGATCCGA TGGCGTACAG CAACCTGCTG TTCTGCCAGT CGCACAAAAT CGACGTGTCG
ATCCGCGAGC TGTTCGACGC GCATCGCGCG TTCGGCGAGC TGTACGAAGC GCCGCTGCGC
GGCGCGACGC CGAAACATGC GAACTCCCGC GATCCGGAAC GCCGCCTGCG CATCGGATTC
GTGTCGGGCG ACCTGTTCCT GCACGCGGTG TCCTCCTATC TGCTGCCGCT CGTCGACGAG
CTCGCGAAGG ACCCGAGCGT GTCGCTGCAC TTCTATTACA CGTTCGCCCG CGAAGATTCG
GTGACCGAGC GGATTCGCTC GTACGCGCAA GGCTGGCACA TGGTGATGCC GCTCAGCGAC
GAGCAATTCG CCGAACGCGT GCGCCACGAC AGGATCGACA TCCTCGTCGA CCTGTCCGGC
CACAGCGGGC GCAACCGGCT GCCGATGTTC GCGCGCAAGC CCGCGCCGAT CCAGGTGAGC
TGGATCGGCT ACCCCGGCAC GACCGGGCTC GAGGCGATCG ACTATTACCT CGCCGATCCG
TACGCGGTGC CGTTCGGCCC GATGCAGGCG CAGTTCACCG AGAAGATCGT CCACCTGTCG
TCGGGCGCGA CGTTCTCGCC GGACGGCAAC GCGCCGCCCG TCAACATGCT GCCCGCGCTG
CACAACGGCC ACGTGAGCTT CGGCAGCTTC AACCGGCTCA ACAAGCTGCG GGGCGACGTG
ATCGCCGTGT GGGCGCGCAT CATGCGCGCG GTGCCCGGTT CGCGCATCGT GCTCGGCTCG
ATTCCGAAGG ACGGCGGCGG GGCCGCGATG ATCGAGTGGT TCGAGCAAGA AGGGATCGCG
CGCGAGCGGC TGTCGTTCCA GCCACGCTCG GTCACGGCCG TCTATCTGCA GCAGCACCAT
CACGTCGACG TGTGCCTCGA CACGTTCCCG TACACCGGCT CGACCACCGT GCTCAACGCG
CTGTGGATGG GCGTGCCGAC GCTGACGATG CGCGGCGAGA CCTTGCCGAG CCGCGCCGGC
CTCACATGGA TGTCGCACGT CGGGCTCGAA TCATTCATCG CAGGCGACAT CGACGACTTC
GTCGCCAAGG GCATCGCGCT CGCGTCCGAC ATCCCGGCGC TCGCGCGCAT CCGCGGCGAG
TTGCGCGAGC GCTGCATGCG CTCGCCGGCG TTCCAGCCGC AGCGCGTCGC GCAGGATGTA
TCCGACGCCT TTCGCATCAT GTGGCGCCGC TGGTGCGACG GCCAGCCGCC CGCCCCGTTC
GCGGTGCCGC CGCGCGACGC AACGACAACC GTCGCAGGAG ACCGCTCATG A
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| Protein sequence | MSESTTSDTL TPEQQFEEDI ALVLKNAIEL HHQGDFENAR ALYEAIVDAK PDHADAQYDL
GVLKVQIGRA ADALPHFEIA LGGAPNNGQY WVSYVNALID AGQIAAAWTA LGLCQQRGVR
GPAVDGLILR LAHSEEGKPA YIGTAAAAPE AAAPADAAEN AAEPARADAR KPSEQDVRRF
ATLYNKRRMA EAIKFARALA QRYPGSGVAW KSLGFALHRD GQYGPACEAL TKGAAMLPDD
AECNTLYADT LRVLNRLADA EAQVRRVLDG TPDYAEAHRV LNMTLSARGR YQEAIEAGRR
SVELAPNSVN AHGSLAVTLS DYGQTDEAEI HFRRAHELNP KDPMAYSNLL FCQSHKIDVS
IRELFDAHRA FGELYEAPLR GATPKHANSR DPERRLRIGF VSGDLFLHAV SSYLLPLVDE
LAKDPSVSLH FYYTFAREDS VTERIRSYAQ GWHMVMPLSD EQFAERVRHD RIDILVDLSG
HSGRNRLPMF ARKPAPIQVS WIGYPGTTGL EAIDYYLADP YAVPFGPMQA QFTEKIVHLS
SGATFSPDGN APPVNMLPAL HNGHVSFGSF NRLNKLRGDV IAVWARIMRA VPGSRIVLGS
IPKDGGGAAM IEWFEQEGIA RERLSFQPRS VTAVYLQQHH HVDVCLDTFP YTGSTTVLNA
LWMGVPTLTM RGETLPSRAG LTWMSHVGLE SFIAGDIDDF VAKGIALASD IPALARIRGE
LRERCMRSPA FQPQRVAQDV SDAFRIMWRR WCDGQPPAPF AVPPRDATTT VAGDRS
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