Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3739 |
Symbol | thiO |
ID | 4899551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3648379 |
End bp | 3649512 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640136965 |
Product | glycine oxidase ThiO |
Protein accession | YP_001067969 |
Protein GI | 126451980 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC GTGCGTCTGA ACCCGATTTC GCGGTGCTGG GCGGCGGCCT CGTCGGCCGC CTGATCGCGT GGCGCCTCGC GGGCGCGGGA TACCGCGTGT CGCTCTACGA GCGCGGCGAC GCGGCGGGCT CGGGCTCGGC CGCATGGGTC GCGGCCGCGA TGCTCGCGCC GCTCGCCGAA GCCGCGAGCG CCGAGCGCCT CATCACCGAT CTCGGCGTCG CGTCGTTCGA TCTGTGGCCG AGCTGGCTTG CCGAGCTGCC GGAGCCCGTC TACTTCCAGC GCAACGGCAC GCTTGTCGTC TGGCATCACG CGGACCGCGC GGAAGCGCCG CTCTTCGAGC GCCGCGTGCG CGCGAACGCG AGCGCCGAGC TGCTCGACGG CGGCCTCATC GCGCTCGCGG GCGCGCAGCT CGACGCGGCC GAGCCGGCGC TCGCCGGCCG CTTCGCGCGC GGCCTGCTGC TGCCGCGCGA AGGCCAGCTC GACAATCGCC AGGCGCTGCG CGCGCTCGCC GCGGGCTTGG CCGAGCGCGG TGTCGACGTG CACTGGAATG CCGCCGTCGC GCCCGATGCC GCGCCCGCCG CGCGCATCAC GATCGACTGC CGCGGGCTCG GCGCGAAGGC GCAGATGCCG GCGCTGCGCG GGATTCGCGG CGAAGTCGCG CGCGTGCACG CGCCCGGCAT CGGCCTCACG CGCCCCGTGC GACTCTTGCA TCCGCGCTAT CCGCTGTACG TCGCGCCGAA GGAGAACGAT CTCTACGTGA TCGGCGCGAC CGAGATCGAG GGCGAGGACA TGTCGCCCGT CAGCGTGCGC TCCGCGCTCG AATTGCTGAG CGCCGCGTTC TCCGTGCACC CGGCGTTCGG CGAGGCGCGT ATTCTTGAAC TGAACACGCA ATGCCGGCCG ACGCTGCCCG ACCATCGTCC GGCGCTCGTG TGGGACGGCG GCGCGACGCT CGCGGTCAAC GGCCTGTACC GGCACGGCTT CATGATCGCG CCGGAAATCG CCGATGCCGC GGCCCGTTTC GCGCAGGCGC TCGTCGAGCG TACCGTGAAG GATGCCGATA CGTTCGCCGC GTGGCGGCGC GACGCGCGCT GGCCGGCGCT GCTGCAGCAG CGCGCGGCGC ACGCGTCCGC GTGA
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Protein sequence | MNMRASEPDF AVLGGGLVGR LIAWRLAGAG YRVSLYERGD AAGSGSAAWV AAAMLAPLAE AASAERLITD LGVASFDLWP SWLAELPEPV YFQRNGTLVV WHHADRAEAP LFERRVRANA SAELLDGGLI ALAGAQLDAA EPALAGRFAR GLLLPREGQL DNRQALRALA AGLAERGVDV HWNAAVAPDA APAARITIDC RGLGAKAQMP ALRGIRGEVA RVHAPGIGLT RPVRLLHPRY PLYVAPKEND LYVIGATEIE GEDMSPVSVR SALELLSAAF SVHPAFGEAR ILELNTQCRP TLPDHRPALV WDGGATLAVN GLYRHGFMIA PEIADAAARF AQALVERTVK DADTFAAWRR DARWPALLQQ RAAHASA
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