Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3692 |
Symbol | |
ID | 4903137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3607235 |
End bp | 3609004 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640136918 |
Product | putative lipoprotein |
Protein accession | YP_001067923 |
Protein GI | 126455225 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAATGA GCCATACCAA GGGGTTTGCC AAGCTGGCAT CGGTCGTCGC AGTCGGAGCG GCGCTCACGG CATGCGGGGG CGGTGGAGGA TCTGGTACCA GTACGACGAC AGCCATCACA AATACCCAGC TCACGGGCAA GGCGATCGAC GGCTACCTGG CGGGCGCTAC TGTCTGCTTC GATAACGGTC ACGGTGCGTG CGATCCGAGC CTGCCGTCCA CCACGACCGA TGCCAGCGGC AATTACACGC TCAACGTTTC CAGCAACGTA ACCGGCAAGC AGCTCGACGT GCTCGTCACC TCGAACACGA CCGACGGCGG CAGCAAGTTC ACCAGCACGT TCGCGATGTC GGCGATCGTT TCCGGCAACT CGCAAAACGT CACGCCACTC ACGACGATGG TGGTCGCGCA GCTGAAGGCG GGGAAGTCGC AAGCAGATGC GATCACAGCC GTGCAGAACC TCATCGGCAG CAACGTTGAT CTGAATGCGG ACTATGTAGG CAACGGCGAC GCCAGAACGA CAGCTACTGC GGCTAGCATG GTCAGTCACA TGACGGCGCT TGCCGGCCAG GGGCCAATCT CGTGGTCGCA AGTGCAGGCA ACCATGAACG CGTACGCTGC AAAAGGGTCG GTCATCGGCG TGCAGCAATC CGATGTCGAT GCACAGCTCA CTAATCCTGC CTATAGCTCG CCGGTCGATG CGACGACGGC GCTTGCTAGT CCGCTTTACA CGGTTGATGG GGACCTTTCG CAGTTCATCG TCGGGAGCAG CATTTCGGCG GCGCTTTCGC CGGTTCGCGA GAACTTCACG CTCTCCGGTT CGACGCTTTC GGTTACGCAA GAAGCTCAGA GCAACGGCGC GTGGTCGGCG GCTTCGCCGG TCGGCAGTTA CGACGCGGGT TTCAGCGGTT CTTGGGTGTC CAATGACGCT GGCGTTGGTG CATACGCCAT GAAAGCGGAC GGCACATGGA CCAGCTGGTT GACGGCCGCG CAGTTGCATC CGTCGTACAG CCTATCCACG GTCGGCTCCA AGCTCGTCGG CACCGATCCG AATACGGGCG ACGCGCTCAC GGTCGCCTAC CGGATGATCG ATGTCAGCGG CCAGCCGCTC TCGAGCGCGC TGCAGATCGA CTATCGGAAT CCCGTGCGCG GAGCCATGAC GGGCACGTTT CCGTCCGGGA CGACCGCCTA CCTTGCTACG ACCGCCTATG CGAACGATCG CCTTATCCTC GTCAACCAAG GGTTCGGTAT GCCTTGGATC AACGGCGCGG ACGTGAACTC GTCGACGATC GTCAATGGCT CGATTCTGTA CACCCTCGGC GACCCCAGCA CGACTTACAC GGCGGTGCAA CAGGCCGTTG GGACGCAGAC GGACATCGCG GGTGGGTGCC TGCTGCTCAG CATTCAGGCA GGCGGTGTCG CGCAAGTGGT CCAAAGCGGT AAGTCGGGAT GCAACTACGG CAATGTATCG CTCTCGTTCC CGGTCACCGG CAGCTGGTCG GTCTACTCGC GCAATGCCAA CGTCATCACG ATCAGCCTGC CGAAGTCCGT TGGTGCGCCG ACCGTGCCAA TCGATGATGA CATCAAGAAT GTGATCAACG CTGGCGGTTC GCTCGTCGTC GGCCTGATGA ACGGCAAGCT CATGGGTGGT TACATGCTAC CGGCCAGCCA GCCGCAAACG GTCGCTCAAT TCCCGGCAGC GACGACCGAC ACCATCGCCG CGTCGATGCG CGCCGCAGCC GCGAGCTTGG GCATCCAACA AAACCCATAA
|
Protein sequence | MKMSHTKGFA KLASVVAVGA ALTACGGGGG SGTSTTTAIT NTQLTGKAID GYLAGATVCF DNGHGACDPS LPSTTTDASG NYTLNVSSNV TGKQLDVLVT SNTTDGGSKF TSTFAMSAIV SGNSQNVTPL TTMVVAQLKA GKSQADAITA VQNLIGSNVD LNADYVGNGD ARTTATAASM VSHMTALAGQ GPISWSQVQA TMNAYAAKGS VIGVQQSDVD AQLTNPAYSS PVDATTALAS PLYTVDGDLS QFIVGSSISA ALSPVRENFT LSGSTLSVTQ EAQSNGAWSA ASPVGSYDAG FSGSWVSNDA GVGAYAMKAD GTWTSWLTAA QLHPSYSLST VGSKLVGTDP NTGDALTVAY RMIDVSGQPL SSALQIDYRN PVRGAMTGTF PSGTTAYLAT TAYANDRLIL VNQGFGMPWI NGADVNSSTI VNGSILYTLG DPSTTYTAVQ QAVGTQTDIA GGCLLLSIQA GGVAQVVQSG KSGCNYGNVS LSFPVTGSWS VYSRNANVIT ISLPKSVGAP TVPIDDDIKN VINAGGSLVV GLMNGKLMGG YMLPASQPQT VAQFPAATTD TIAASMRAAA ASLGIQQNP
|
| |