Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3656 |
Symbol | |
ID | 4900475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3558723 |
End bp | 3560561 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640136882 |
Product | hypothetical protein |
Protein accession | YP_001067887 |
Protein GI | 126453567 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TGTTGCCGTA TTACGAACGC GAACTGTCGT TTCTGCGGCG CTATTCGCTC GAATTCGCGA ACCGTTACCC GAAGATCGCC GCGCGTCTCG CCCAGACGGG CGAGCAGTGC GAGGATCCGC ACGTCGAGCG GATGATCGAA TCGTTCGCGC TGCTCGGCGC GCGGATCAAC AAGAAGCTCG ACGACGAATA TCCCGAGTTC ACCGAAGCGC TCGTCGAAGT CCTCTACCCG CACTATCTGC GGCCGTTCCC GTCATGCTCG ATCGCGCAGT TCGGTGCGCC GCATGCGTTC GCGGAGCTCA CCGAGCCGCG GATCGTCGAG CGCGGCACCG AGCTGAAGAG CCGCGCGATT CGCGGCGTGC AGTGCCGGTT CCGCACCGCG TACGACGTGA CGCTCGCGCC GATCCGGCTC GCCGATGCGC GCTACGGATC GGTCGCGGTG GCGCCCGCCG CAGCAAGGCT GCCCGGCAAC GCGACGGGCG TGATCTCGAT CGCGTTCGAA TCGACGTCGC CGCAGCTCGA TCTTGCCGCG CTGAAGCTCG GCAAGCTGCG CGCGCATTTG CACGGCGAGC AATCGTTCGT CGCCGCGCTG GCCGATTGCC TGTTCGCGCA CGCGCTCGCC TGCTACGTCG AGCCCGATCG CGGCGGCCGC TGGATCGCGC TCGGCAAGAC GCCGTTCGAG CACGCGGGCT TCGACGAGAC CGACGCGCTG ATCGACTATC CGGCCCGTTC GCACCCGGCC TATCGGCTGC TGACCGAATA CTTCGCATTC CCGGATAAAT TCAACTTCGT CGATTTCGAT CTGGGCGCAC TCGCGCGGCG CGCGGGGCCC TGCCGGCAGC TGACGCTGCA CATCGCGCTG CGCGACGTGC GCGGCGATTC GCATGTCGCG CGGCTGCTCG ATCTGCTGAG CGCGAGCCAT TTCCGGCTCT TCTGCACGCC GGTCGTGAAC CTGTTCCGCC AGCACGGCGA GCCGATTCGG GTCGACCACC GGGCGGTGTC GTACCCGGTG ATCGGCGATG CGCGCCGCGC GTTCGCGTAC GAGGTATATT CGATCGATTC GGTGCATCTC GTGCGGCAGC GCGCGGACCG CGAAACGCTC GTCGAATTCC GGCCGTTCTA TTCGCTGCAT CACGGCGAAG CCGCGCAGGC CGGCCACTAC TGGTTCGCGC GGCGCAACGA CGACGTCGCG CGCAAGAGCC CCGGCTACGA GACCGAGATT TCGGTCGTCG ACGTCGACTT CGAGCCGGGC GCGCCGCAAA CCGATACGTT GAGCCTCGAT CTCACCTGTA CGAACCGCGA CCTGCCCGCC GCGCTCGCAA CGGGGCTCGA CGGCGGCGAT CTCTTCATCG ACGGCGGCGA GCAGCCCGGC CCGATCGCGC TATTGCGCCG GCCGACGCCG AGCGCGCGCT TCGAGCGCGG CCACGCCGCG CACTGGCGCC TCGTGTCGCA TCTCGCGCTC AATCACGTGT CGCTTGCCGA AGAAGGGCTC GCCGCGCTGA AGGAAGCGCT CGTGCTGTAC GATCTGAGGC GCTCCGCGGT GTCGACGCGC CATATCGACG GGATCGTCGG CATCGAGCAG AAGAGCGCGG TGCAATGGCT GCCGGGCAAG CCGTTCGCGA CGTTCGTGCG CGGCGTCGAG ATCCGGCTCG CGATCGACGA CGAACATTTC GTCGGCTCGA GCCTCGCGAC GTTCGTGCGG ATGATCGACG CGTTCTTCGG GCTGTACGTG CACCTCAACA GCTTTGTTCA ACTGATCGTC GTGTCCAGGC GCACCGGCGA GGAGATCATG CGATGCAAAC CGCGCAGCGG CGAATCGATC CTGGCGTAG
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Protein sequence | MEELLPYYER ELSFLRRYSL EFANRYPKIA ARLAQTGEQC EDPHVERMIE SFALLGARIN KKLDDEYPEF TEALVEVLYP HYLRPFPSCS IAQFGAPHAF AELTEPRIVE RGTELKSRAI RGVQCRFRTA YDVTLAPIRL ADARYGSVAV APAAARLPGN ATGVISIAFE STSPQLDLAA LKLGKLRAHL HGEQSFVAAL ADCLFAHALA CYVEPDRGGR WIALGKTPFE HAGFDETDAL IDYPARSHPA YRLLTEYFAF PDKFNFVDFD LGALARRAGP CRQLTLHIAL RDVRGDSHVA RLLDLLSASH FRLFCTPVVN LFRQHGEPIR VDHRAVSYPV IGDARRAFAY EVYSIDSVHL VRQRADRETL VEFRPFYSLH HGEAAQAGHY WFARRNDDVA RKSPGYETEI SVVDVDFEPG APQTDTLSLD LTCTNRDLPA ALATGLDGGD LFIDGGEQPG PIALLRRPTP SARFERGHAA HWRLVSHLAL NHVSLAEEGL AALKEALVLY DLRRSAVSTR HIDGIVGIEQ KSAVQWLPGK PFATFVRGVE IRLAIDDEHF VGSSLATFVR MIDAFFGLYV HLNSFVQLIV VSRRTGEEIM RCKPRSGESI LA
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