| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3487 |
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| Symbol | |
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| ID | 4901538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3392657 |
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| End bp | 3393436 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640136713 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001067724 |
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| Protein GI | 126454797 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCGGC TCGCGGGCAA GGTCGCGATC GTGACGGGCG CGGGGCGCGG CATCGGCGCG
GCGATCGCGC GCGCGTTCGT GCGCGAAGGC GCGGCCGTCG CGATCGCGGA GCTCGACGCG
GCGCTCGCCG AAGAGAGCGC CGACGCGATC GCGCGCGATA CGGCCGGCGC GCGGGTGCTC
GCGGTGCCGA CGGACGTCGC GCGGGCCGAG TCGGTCGCGG CGGCGCTCGC GCGCACGGAG
CGCGCATTCG GCCTGCTCGA CGTGCTCGTG AACAACGCCG GCGTCAACGT GTTCGGCGAT
CCGCTCGCGC TCACCGACGA AGACTGGCGG CGCTGCTTCG CGATCGATCT CGACGGCGTC
TGGAACGGCT GCCGCGCGGC GCTGCCCGGC ATGGTCGAGC GCGGGCGCGG CAGCATCGTG
AACATCGCGT CGACGCATGC GTTCAAGATC ATTCCGGGCT GTTTCCCGTA CCCGGTCGCG
AAGCATGGCG TGCTGGGCCT CACGCGCGCG CTCGGCATCG AATACGCGCC GCGCAACGTG
CGCGTGAACG CGATCGCGCC CGGCTACATC GAGACGCAGT TGACGCACGA CTGGTGGAGC
GCGCAGCCCG ATCCGCAGGC CGCGCGCCGC GAGACGCTCG CGCTGCAGCC GATGAAGCGG
ATCGGGCGTC CCGACGAAGT CGCGATGACC GCGGTATTCC TCGCGTCGGA CGAAGCGCCG
TTCATCAACG CGAGCTGCAT CACGATCGAC GGCGGCCGCT CGGTGCTGTA CCACGACTGA
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| Protein sequence | MNRLAGKVAI VTGAGRGIGA AIARAFVREG AAVAIAELDA ALAEESADAI ARDTAGARVL
AVPTDVARAE SVAAALARTE RAFGLLDVLV NNAGVNVFGD PLALTDEDWR RCFAIDLDGV
WNGCRAALPG MVERGRGSIV NIASTHAFKI IPGCFPYPVA KHGVLGLTRA LGIEYAPRNV
RVNAIAPGYI ETQLTHDWWS AQPDPQAARR ETLALQPMKR IGRPDEVAMT AVFLASDEAP
FINASCITID GGRSVLYHD
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