| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3337 |
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| Symbol | phnD |
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| ID | 4900581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3260163 |
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| End bp | 3261158 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640136563 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001067574 |
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| Protein GI | 126454619 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0142532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA TCCGCTCTCT CGTCGCCTGC GTGGCCGCGC TCGCGTGCGC CGCCGCCGCC
CATGCGCAAA CGCTGAACTT CGGCATCATC TCCACCGATT CGTCGGCGGT GCTCAAGCGC
CGCTGGCAAC CGCTCATCGA CGACATGAAC CGCAAGACGG GCCTCGACGT GAAGGCGTTC
TTCGCGACCG ACTACGCGGG CATCATCGAG GGCATGCGCT TCAACAAGGT ACAGCTCGGC
TACTTCGGCA ACGCGTCGGC GCTCGAGGCG GTCGAGCGCT CGAACGGCGA GGTGTTCGCG
AAGCTTCGCC ACGCGAACGG CGAGACCGGC TACTACTCGG TGCTGATCAC GAACGCGAAC
AGCCGCTTCA GGACGCTTGA CGACGTGTTC AGGAACCCGA AGGACGTGAC GCTCGGCTTC
GGCGATCCGA ACTCGACGTC CGGCACGCTC GTGCCCGCGT ACTATCTGTT CGCGCCGCGC
GGCATAGCGC CGCGCACCGC GTTCAGGACG GTGCTGCCGT CGAGCCACGA GGGCAATCTG
CTCGCGGTCG TCAACGACAA GATCGACATC GCGACGAACA ACACCGACGT GCTCGGCATG
CTGAAGAAGC AGCATCCGGA TCAATACGCG CGGGTGCGCG TGCTGTGGAC ATCGCCGCAG
ATCGCATCCG ATCCGCTCGT GTGGCGCAAG GATCTGCCCG ACGCGACCAA GCAGAAGCTG
CGCGATTTCT TCTACAACTA CGCGAAGACC GATCCGCACG AGCAGGCGGT AATGGCGGGC
ATTCGCAATC TGGTCGGCTT CGCGCCGTCG TCGGATGCGC AACTGATCCC CGTGCGCAAG
ATCGTGCTGT TCCAGCAGAA GCAGAAGATC GAGACGGACA TGGCGCTGTC GGCCGATGCG
CGCCGCGCGC AGCTCGCGGC GCTCGATGCG AGGCTCGCCG CGCTCGACGC GTCCGGCGCG
GCGGATGCGT CGAGCGCGCA GGCGGACAAG CGATGA
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| Protein sequence | MKLIRSLVAC VAALACAAAA HAQTLNFGII STDSSAVLKR RWQPLIDDMN RKTGLDVKAF
FATDYAGIIE GMRFNKVQLG YFGNASALEA VERSNGEVFA KLRHANGETG YYSVLITNAN
SRFRTLDDVF RNPKDVTLGF GDPNSTSGTL VPAYYLFAPR GIAPRTAFRT VLPSSHEGNL
LAVVNDKIDI ATNNTDVLGM LKKQHPDQYA RVRVLWTSPQ IASDPLVWRK DLPDATKQKL
RDFFYNYAKT DPHEQAVMAG IRNLVGFAPS SDAQLIPVRK IVLFQQKQKI ETDMALSADA
RRAQLAALDA RLAALDASGA ADASSAQADK R
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