Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3287 |
Symbol | |
ID | 4899953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3203097 |
End bp | 3203879 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640136513 |
Product | capsular polysaccharide export inner-membrane protein |
Protein accession | YP_001067524 |
Protein GI | 126453307 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.115381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATT TCGGTCGATC GTTGGCGGTT CAGCGAAGAG TGATATTCGC ATTGCTGATG CGGGAAGTCC TGACCCGGTA CGGGCGTCAC AACATCGGAT TCCTGTGGCT ATTTGTCGAG CCGATGATCT TCACGGTCGG GATTACCATT CTTTGGAATG CGACAGGAGC GACTCACGGG TCGAATCTCC CTATTTCCGC GTTTGCTTTG ACCGGCTATT CGACGGTGTT GCTTTGGCGA AACATGCCCG GGCGGTGCAG TATGGCGGTC ACGCCGAATT TGGCGCTGAT GTATCACCGA AATGTCAAGG TCATAGATAT TTTTATTGCT CGTATTCTGT TGGAGGTGGT CGGTAATACC GCATCCTTTT TCGTGTTGAT GATTACATTT CATGCGCTGG GCCTCGTTGA CTATCCCGAG GATATTCTCG AGGTGATGTT TGCCTGGGTC ATGATTATCT GGTTTGGTGC GTCGCTTGGT TTCATCATTG GAGCGTTAAG CGAGAAGACG GAGCTCGTCG AGAAGCTTTG GCATCCGGTG ACCTATCTGA TGTTTCCGCT ATCGGGCGCC ATCTTCATGG TGGATTGGCT TTCGCCGGCA TTTCAAAAAA TCGTCCTGTG GCTGCCCATG GTGCACGGAG TCGAAATGCT TCGCGAAGGG TACTTCGGCA GCCTCGTCGC GGCACATTAT GATATCGGAT ATATGGCGTG CGCTTGCCTG GCGATGTCTC TGGTCGGTCT CGCGCTGGTT CGCGACGTGG GTCGTGAGGT CACGCCAGAA TGA
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Protein sequence | MTNFGRSLAV QRRVIFALLM REVLTRYGRH NIGFLWLFVE PMIFTVGITI LWNATGATHG SNLPISAFAL TGYSTVLLWR NMPGRCSMAV TPNLALMYHR NVKVIDIFIA RILLEVVGNT ASFFVLMITF HALGLVDYPE DILEVMFAWV MIIWFGASLG FIIGALSEKT ELVEKLWHPV TYLMFPLSGA IFMVDWLSPA FQKIVLWLPM VHGVEMLREG YFGSLVAAHY DIGYMACACL AMSLVGLALV RDVGREVTPE
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