| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3243 |
|---|
| Symbol | ygbF |
|---|
| ID | 4903091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3154424 |
|---|
| End bp | 3155173 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640136469 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_001067481 |
|---|
| Protein GI | 126455302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACC GTTTCCCCTG GCTGCGCACG GCCGCCGCGC TGTGCGTGGC CGGTGCGGCC
CTCCTGGCCG CGCCGGCGCA CGCGGGCCTC TTCGATGACG ACGAAGCCCG CCGTGCGGTG
CTCGATCTGC GCAGCAAGTC CGACAGCCAG GCGAGCCAGC TCGCCGCGGC GCAACGCACG
ATCCTCGATC AGACCAACCG CCTCGACCAG TTGAACCAGC AGGTCGCGAC GCTGCGCGGC
GAGAACGAGG ACCTGACGAA CCGCCTGACG ACGCTCGAGC GCCAACAGAA GGAGTACTAC
ACCGATCTCG ATACGCGCCT GAAGAAATTC GAGCCGCAGA AGACGACGGT GGACGGCGTC
GAAGGCACGG TGCAGCCGGG TGAAACGGAC GCGTTCAACG CGGCGTCGCA ACAGTTCCGC
AACGGCAACT TCAAGGGCGC CGCGGCTTCG TTCCGCGCGT TCATCGCCAA ATACCCGCAA
AGCCCCTATC AGCCGACCGC GCAATACTGG CTCGGCAACG CGCAGTACGC GCTGCGCGAC
TACAAGGGCT CGACGGCGAC GTGGCAAGGC CTCGTGAAGA ACTATCCGCA GCACCCGCGT
GCGGCGGACG CGCTGATCGC GATCGGCACC AATCAACTCG AGCAAGGCCA GAAGGCGGCC
GCGAAGAAGA CGTTCGAGCA GGTCGTGTCG CAGTTCCCGG GCTCGAATGC GGCGGAAACC
GCGCAGAGCA AGCTGGACGC GATCAAGTGA
|
|---|
| Protein sequence | MTHRFPWLRT AAALCVAGAA LLAAPAHAGL FDDDEARRAV LDLRSKSDSQ ASQLAAAQRT
ILDQTNRLDQ LNQQVATLRG ENEDLTNRLT TLERQQKEYY TDLDTRLKKF EPQKTTVDGV
EGTVQPGETD AFNAASQQFR NGNFKGAAAS FRAFIAKYPQ SPYQPTAQYW LGNAQYALRD
YKGSTATWQG LVKNYPQHPR AADALIAIGT NQLEQGQKAA AKKTFEQVVS QFPGSNAAET
AQSKLDAIK
|
|---|
| |