| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3241 |
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| Symbol | tolB |
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| ID | 4899327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3152582 |
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| End bp | 3153874 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640136467 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001067479 |
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| Protein GI | 126451941 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.786429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC TAGGTTTCAG GGCACTCGTG GCCTCGTGTC TGATTGCCGC GGGCGGCGCC
GCCCACGCGC AGGTGAACGT TCTGATCACG GGCGTCGGCT CCACCCAGTT TCCGATCGCC
ACCGCGAATT TCGTCAACGA AGCGAGCCTG CCGCAGCAGG TCACGTCGGT CGTGCGCGGC
GACCTCGCGC GAAGCGGCAA ATTCTCCAAC GTCGACGCGG GCAGCACGCC CGTGCCGGAA
ACCGCATCGG TCGATTTCGG CGCATGGAAG GCGAAAGGCG CGAACGCATT CGTCGCGGGC
AGCGTGAACC GCGAGCCGAA CGGCCAGTAC AAGGTCAACT TCATCCTCTA CGACACCGTC
AAGCAGCAAA GCCTCGGAGG GCTGTCGCTC ACGACGTCGA ACGACAACGA GGGGATGCGC
AAGACCGGCC ACAAGATCGC CGACTACATC TACCAAAAGC TGCTCGGCGT GCGCGGCGTC
TTCAACACGC GCCTGTCGTA CGTGCAGCGC ACGGGCAACG TCTACAAGCT GCTGATCTCC
GATTCGGACG GCCAGAACGC GATCCCCGCG CTCACGAGCA AGGAGCCGAT CATCTCGCCC
GCGTGGTCGC CGAGCGGCAC GAAGGTTGCG TACGTGTCGT TCGAGTTGAG AAAGCCCGTC
GTGTACATCC ACGATCTGCC GACCGGGCGC CGCTACGTGA TCTCGAACCA GAAAGGCAAC
AACAGCGCGC CCGCGTGGTC GCCGGATGGC CAGACGCTTG CCGTCGCGCT GTCGCTCACG
GGCAATACGC AGATTTACTC CGTCAGCTCG ACGGGCACCG GGCTGCGCCG CTTGACGCGC
AGCAGCTCGA TCGACACCGA GCCGTTCTAC TCGCCTGACG GCAAGTGGAT CTATTTCACG
AGCGACCGCG GCGGCGCGCC GCAAATCTAC CGGATGCCCG CCGAAGGCGA GAGCGCCGGC
GCCGCTCAGC GCGTGACGTT TACCGGCAGC TACAATACGA GTCCGCGCGT CAGCCCGGAC
GGCAAGCTGC TCGCGTACAT CTCACGCACG GGCGGGGGCT TCAAGCTGTA CGTTCAGGAT
CTGCAATCGG GTGCGGCGAA CGCCGTCACC AACACGACGC GCGACGAATC GCCGAGCTTC
GCGGCGAATG GTCAGTACAT TCTGTACGCT ACACAATCGG GGGGCCGCAG CGTGCTGGCG
GCCGTTCCGT CCGACGGCAG CGCGCCGCCG CAGATCTTGT CCGTTCAGGG CGGCGCGATC
CGCGAGCCGT CCTGGGGGCC CTTCATGCAA TGA
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| Protein sequence | MTKLGFRALV ASCLIAAGGA AHAQVNVLIT GVGSTQFPIA TANFVNEASL PQQVTSVVRG
DLARSGKFSN VDAGSTPVPE TASVDFGAWK AKGANAFVAG SVNREPNGQY KVNFILYDTV
KQQSLGGLSL TTSNDNEGMR KTGHKIADYI YQKLLGVRGV FNTRLSYVQR TGNVYKLLIS
DSDGQNAIPA LTSKEPIISP AWSPSGTKVA YVSFELRKPV VYIHDLPTGR RYVISNQKGN
NSAPAWSPDG QTLAVALSLT GNTQIYSVSS TGTGLRRLTR SSSIDTEPFY SPDGKWIYFT
SDRGGAPQIY RMPAEGESAG AAQRVTFTGS YNTSPRVSPD GKLLAYISRT GGGFKLYVQD
LQSGAANAVT NTTRDESPSF AANGQYILYA TQSGGRSVLA AVPSDGSAPP QILSVQGGAI
REPSWGPFMQ
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