Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3221 |
Symbol | |
ID | 4902226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3138919 |
End bp | 3139722 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640136447 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001067459 |
Protein GI | 126453772 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00625745 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATCACC GCATGAATTT TTCGACCATC GATGCCGACA CGCTCGACGA ACGCAAGTTC GTCGTCGCCC TCGCCCGGGG GCTGGATCTG CTGCGCGCGT TCCGGCCCGG CGAGACGATG CTCGGCAACC GCGATTTCGC CGAGCGCACC GGGCTGCCGA AGGCGACCGT CAACCGGCTC GCATACACGC TGACGGTGCT CGGCTATCTG CGCTACGACG ACGCGCTCGG CAAGTACGCG CTCGACGCGG GCGTGCTGTC GCTCGGCTAC GCGTTGCTCG CGGGCTCGGA CACGCTCGCG CTCGCGCGGC CGCACATGCA GGCGCTCGCG CGCGAGATCG GCGCGGCGGT GTCGCTCGGC TGCCGTGACG GTCTCGACAT GATCTACCTG GAGACGATTC GCAGCGAGAC GGCGCTGACG CTCGGGCTGG CGTCCGGCTC GCGGCTGTCG ATGCTGACGA GCTCGATGGG GCGCGCGTAT CTCGCCGTGC AGCCTCCCGA CGCGCGCGCG GCGCTCTTCG CCGAGCTGCG CAAGACGGTG GGGAAGGGGC GGGCGGGGGC GGCGCTCGTC GACGCGGCGC GGCGCGCGGC CGATGCGTTC GCGGCCGACG GCTGCTGCTA TTCGTTTGGC GACTGGCACG GCGACGTGAA CGCGGCCGCC GTGCCGTTTC GCGAGCCGCG CGAAGGGCGC TGGCTGATTC TCAGTTGCAG CGGGCCGGCG TCGTCGATGG GCGAGGACGT GTTCCGCAAC CGGATTGGCC CGAAGCTGAA GGTGCTCGCG CGGCGGCTCG GAGAACCGGG CTGA
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Protein sequence | MYHRMNFSTI DADTLDERKF VVALARGLDL LRAFRPGETM LGNRDFAERT GLPKATVNRL AYTLTVLGYL RYDDALGKYA LDAGVLSLGY ALLAGSDTLA LARPHMQALA REIGAAVSLG CRDGLDMIYL ETIRSETALT LGLASGSRLS MLTSSMGRAY LAVQPPDARA ALFAELRKTV GKGRAGAALV DAARRAADAF AADGCCYSFG DWHGDVNAAA VPFREPREGR WLILSCSGPA SSMGEDVFRN RIGPKLKVLA RRLGEPG
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