Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2840 |
Symbol | rnc |
ID | 4903127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2794149 |
End bp | 2795552 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640136066 |
Product | ribonuclease III |
Protein accession | YP_001067087 |
Protein GI | 126454458 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTAT CCCAGTTGGA AAGCCGGCTG CGCTATGAAT TTCGCAATGC GGAATTATTG CGCCAGGCTT TGACCCATCG CAGTCACAGT GCCACGCATA ACGAACGGCT CGAGTTTCTC GGCGATTCCG TTCTGAATTG CGCGGTGGCC GCCCTTTTGT TTCAGCGCTT CGGCAAGCTG GACGAAGGCG ATTTGTCGCG CGTACGGGCG AACCTCGTCA AGCAGCAGTC GCTGTACGAA ATTGCTCAGG CCCTCAATAT CTCGGACGGC TTGCGGCTCG GCGAAGGCGA ATTGCGCAGC GGCGGATTCC GAAGACCGTC GATCCTCGCG GACGCATTCG AAGCCATCAT CGGGGCGGTG TTCCTCGATG GCGGCTTCGA AGCCGCCCAA GGGGTGATCA AGCGGCTGTA CGTGCCGATT CTCGACCATA TCGATCCGCG CACGCTCGGC AAGGACGCGA AAACGCTGCT GCAGGAGTAT CTGCAAGGCC ACAAGATCGC GCTGCCGACC TACACCGTCG TCGCGACGCA TGGTGCGGCG CACAATCAAC AGTTCGAAGT CGAATGCACG GTGCCGAAGC TGGACATCAA GGTGTCCGGC TCGGGCGCGA GCCGCCGCGC GGCCGAGCAG GCCGCGGCGA AGAAGGCGCT CGACGAGGTG ACGGCGGTGG CGCCGATGCT CGCGGCGAAG CCGAAGCGCT CGAAGAGCGC GCGTGGCGCC AAGCATGTGG AGCCGGAGAT CGTGCCGGGC GTGAAGGGTG TGCAGGAGGC GCTCGATCTG CGCTCGCCCG AGCGCAAGGA GCGCGGCGCG AACCGTGTGG CGGGCGGCGA GGCGAAGGGC GTCGAATCGA AGGCGGTCGA CGCGAAGCAC GGGGAATCGA GGGCCGCGCA GTTGCGCGCG GACGACGCGA AGGCAGGCGA GACGAAGGCG GGCGAGGCAA GGGCTTCGGC GGACGCGAAA GCCGGCGCGC ACACCCACGC GGCCGCTATG CCCGCCGTGC CCGAGCAAGC CGATGATGCC GCCCGGTCGC CCGCGACGAC GCCCGTTGCG GTGATCCGCG CGGCGCACGT CGAGCACGGC CTCGACAAGG GCGAGCCGCG CGCGTCGAAG CCGGCGGAAA AAACCGCTGC GGCGACGGAC AAGCCGCCGG AGAAGGCGAG CGACAAGCCG TCGCCGGAAA AAACGTCGGA AAAAACGCCG GACAAGAGTC ACGAGAAGCA GCTGGACAAG TCTTCCGAGC CGGTGGCGGA AAAGGCGCTC GACAAGACGG CGGACAAGCC GGATGCCGCC GCGCGTCTCC CTGCCGAAAC GGCCGACCGG CCGCCGCGCG CTCGCGACGC GTCGTCGTCC GCCGAGCCGG ATCTGGCCGC CGCGCCCGTG CGCGTCGCCG ATGCAGGTCA TTGA
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Protein sequence | MPLSQLESRL RYEFRNAELL RQALTHRSHS ATHNERLEFL GDSVLNCAVA ALLFQRFGKL DEGDLSRVRA NLVKQQSLYE IAQALNISDG LRLGEGELRS GGFRRPSILA DAFEAIIGAV FLDGGFEAAQ GVIKRLYVPI LDHIDPRTLG KDAKTLLQEY LQGHKIALPT YTVVATHGAA HNQQFEVECT VPKLDIKVSG SGASRRAAEQ AAAKKALDEV TAVAPMLAAK PKRSKSARGA KHVEPEIVPG VKGVQEALDL RSPERKERGA NRVAGGEAKG VESKAVDAKH GESRAAQLRA DDAKAGETKA GEARASADAK AGAHTHAAAM PAVPEQADDA ARSPATTPVA VIRAAHVEHG LDKGEPRASK PAEKTAAATD KPPEKASDKP SPEKTSEKTP DKSHEKQLDK SSEPVAEKAL DKTADKPDAA ARLPAETADR PPRARDASSS AEPDLAAAPV RVADAGH
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