Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2546 |
Symbol | |
ID | 4901259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2499806 |
End bp | 2500846 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640135773 |
Product | ABC transporter, permease protein |
Protein accession | YP_001066800 |
Protein GI | 126454916 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00426967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGAGCT ACATCCTCAA ACGTCTTCTG CTGATGATCC CGACGCTCGT CGGCGTCTTG ACCATCACGT TCGCGGTGAT CCAGTTCGTG CCGGGCGGCC CCGTCGAGCA GGCGGTGCAG GAGCTGCGCA AGGGCGCCGA GCGGGGCGGC GCGCCGTTCG GGATGCGCTC GTACACGGGC GTCGACGCGC AGCAGCTCGC GCAACTGAAG GCGCTGTACG GCTTCGACAA GCCGCCCGTC GAGCGCTACT GGCTGATGCT GGAGCGCTTC GCGCGCTTCG ATCTCGGCGA CAGCTACTTC CATCATCAGA GCGTGTGGTC GCTTGTCGTG TCGAAGCTGC CGGTATCGAT CAGCATCGGC GTGTGGACGT TCCTGCTCAC TTACCTGATC TCGGTGCCGC TCGGCATCGC GAAGGCGGTG AGCAACGGCT CGCCGTTCGA TTTCGCGACG AGCCTCGTCG TGCTCGTCGG CTACGCGATC CCGGGCTTCG TGCTCGGCGT GCTGCTGCTC GTGCTGTTCG GCGGCGGCTC GTTCTGGCAG ATCTTCCCGC TGCACGGCCT CACGTCGGAC AACTTCGCGC AGCTCACGCT AGCCGGCAAG ATCGCCGATT ACCTGTGGCA CATCGCGCTG CCCATCATCG CCTCGGTCGT CGGCAGCTTC GCGGTGATCA CGATGCTGAC GAAGAACGCG TTCCTCGACG AGATCCGCAA GCAATACGTG CTGACCGCGC GCGCGAAGGG GCTCGCCGAG CGCACCGTGC TGGGCAAGCA CGTGTTCCGC AACGCGCTCC TGCCGCTCGT CGTGGGCTTT CCGGCCGCGT TCATCGGCGC GTTCTTCACG GGCAGCCTGC TGATCGAGAC GCTCTTCTCG CTCGACGGGC TCGGGCTGCT GTCGTACGAA TCGGTGATCC GGCGCGACTA CCCGGTCGTG CTCGGCACGC TGTACATCTT CACGCTGATC GGGCTCGCGA CGAAGCTCGT GTCCGATCTC TGCTACGTGT GGGTCGACCC GCGCGTTCAA TTCGAGCAAC TGGAGCGCTG A
|
Protein sequence | MWSYILKRLL LMIPTLVGVL TITFAVIQFV PGGPVEQAVQ ELRKGAERGG APFGMRSYTG VDAQQLAQLK ALYGFDKPPV ERYWLMLERF ARFDLGDSYF HHQSVWSLVV SKLPVSISIG VWTFLLTYLI SVPLGIAKAV SNGSPFDFAT SLVVLVGYAI PGFVLGVLLL VLFGGGSFWQ IFPLHGLTSD NFAQLTLAGK IADYLWHIAL PIIASVVGSF AVITMLTKNA FLDEIRKQYV LTARAKGLAE RTVLGKHVFR NALLPLVVGF PAAFIGAFFT GSLLIETLFS LDGLGLLSYE SVIRRDYPVV LGTLYIFTLI GLATKLVSDL CYVWVDPRVQ FEQLER
|
| |