Gene BURPS1106A_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_2546 
Symbol 
ID4901259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp2499806 
End bp2500846 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID640135773 
ProductABC transporter, permease protein 
Protein accessionYP_001066800 
Protein GI126454916 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00426967 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAGCT ACATCCTCAA ACGTCTTCTG CTGATGATCC CGACGCTCGT CGGCGTCTTG 
ACCATCACGT TCGCGGTGAT CCAGTTCGTG CCGGGCGGCC CCGTCGAGCA GGCGGTGCAG
GAGCTGCGCA AGGGCGCCGA GCGGGGCGGC GCGCCGTTCG GGATGCGCTC GTACACGGGC
GTCGACGCGC AGCAGCTCGC GCAACTGAAG GCGCTGTACG GCTTCGACAA GCCGCCCGTC
GAGCGCTACT GGCTGATGCT GGAGCGCTTC GCGCGCTTCG ATCTCGGCGA CAGCTACTTC
CATCATCAGA GCGTGTGGTC GCTTGTCGTG TCGAAGCTGC CGGTATCGAT CAGCATCGGC
GTGTGGACGT TCCTGCTCAC TTACCTGATC TCGGTGCCGC TCGGCATCGC GAAGGCGGTG
AGCAACGGCT CGCCGTTCGA TTTCGCGACG AGCCTCGTCG TGCTCGTCGG CTACGCGATC
CCGGGCTTCG TGCTCGGCGT GCTGCTGCTC GTGCTGTTCG GCGGCGGCTC GTTCTGGCAG
ATCTTCCCGC TGCACGGCCT CACGTCGGAC AACTTCGCGC AGCTCACGCT AGCCGGCAAG
ATCGCCGATT ACCTGTGGCA CATCGCGCTG CCCATCATCG CCTCGGTCGT CGGCAGCTTC
GCGGTGATCA CGATGCTGAC GAAGAACGCG TTCCTCGACG AGATCCGCAA GCAATACGTG
CTGACCGCGC GCGCGAAGGG GCTCGCCGAG CGCACCGTGC TGGGCAAGCA CGTGTTCCGC
AACGCGCTCC TGCCGCTCGT CGTGGGCTTT CCGGCCGCGT TCATCGGCGC GTTCTTCACG
GGCAGCCTGC TGATCGAGAC GCTCTTCTCG CTCGACGGGC TCGGGCTGCT GTCGTACGAA
TCGGTGATCC GGCGCGACTA CCCGGTCGTG CTCGGCACGC TGTACATCTT CACGCTGATC
GGGCTCGCGA CGAAGCTCGT GTCCGATCTC TGCTACGTGT GGGTCGACCC GCGCGTTCAA
TTCGAGCAAC TGGAGCGCTG A
 
Protein sequence
MWSYILKRLL LMIPTLVGVL TITFAVIQFV PGGPVEQAVQ ELRKGAERGG APFGMRSYTG 
VDAQQLAQLK ALYGFDKPPV ERYWLMLERF ARFDLGDSYF HHQSVWSLVV SKLPVSISIG
VWTFLLTYLI SVPLGIAKAV SNGSPFDFAT SLVVLVGYAI PGFVLGVLLL VLFGGGSFWQ
IFPLHGLTSD NFAQLTLAGK IADYLWHIAL PIIASVVGSF AVITMLTKNA FLDEIRKQYV
LTARAKGLAE RTVLGKHVFR NALLPLVVGF PAAFIGAFFT GSLLIETLFS LDGLGLLSYE
SVIRRDYPVV LGTLYIFTLI GLATKLVSDL CYVWVDPRVQ FEQLER