Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2375 |
Symbol | |
ID | 4901099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 2347068 |
End bp | 2348177 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640135604 |
Product | histone deacetylase family protein putative |
Protein accession | YP_001066637 |
Protein GI | 126454301 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA CCGCTTTCTT CACCGACGAA CGCACTTTCT GGCACACGGG CGGCGCGCAT GCGCTGTTCT TTCCGGTCGG CGGCTGGGTG CAGCCGCCGT CGAGCGCGGG CTATGCGGAA TCGCCCGATT CGAAGCGGCG CCTGCTGTCG CTCGTGCACG CGTCCGGGCT CGCGGCGAAA CTCGACATGT CGAGCGCGCC CGCCGCGACC GACGACGATC TGCGGCGCAT CCACCCCGCG CACTACCTCG ACGCGTTCAA GCGCGCGAGC GACGCGGGTG GCGGCGATCT CGGCGAACTC GCGCCGTTCG GCCGTGGCAG CTACGAGATC GCGGCGCTAT CCGCGGGGCT CGCGCTCGCC GCCGTCGACG CGGTGCTCGC CGAGCGCACG GCCAACGCGT TCTCGCTGTC GCGCCCGCCC GGCCATCACT GCCTGCGTGA CAAGCCGATG GGTTTTTGCC TGCTCGCGAA CATTCCGATC GCGATCGAGG CCGCGCGCGC GAAACATCGC GTCGAGCGCG TCGCGGTGAT CGACTGGGAC GTGCATCACG GCAACGGCAC GCAGTCGATC TACTACGACG ATCCGAACAC GCTGACGATC TCGCTGCATC AGGACCGCTG CTTTCCGCCC GGCTACAGCG GCGCCGACGA ACGCGGCGCG GGCGCGGGTG CGGGCTCGAA CGTCAACGTC CCGCTCCTCG CGGGCGCCGG CGACGACGCG TATCGATACG CATTCGAGCG AATCGTGCTG CCCGCGCTCG ATGCGTTCCG GCCGGAGCTC GTCATCGTCG CGAGCGGGCT CGACGCGAAT GCGGTCGACC CGCTCGCGCG GATGCAACTG CACAGCGACA GCTACCGGTA CATGACGCAT GCGCTGAAGC AGGCCGCGCA GCGGCACTGC GGGGGACGGC TCGTCATCGT GCACGAGGGC GGTTATTCGG AGGCCTACGT ACCGTTTTGC GGGCATGCGA TCGTCGAGGC ACTGGCGGGC ATGCGCACCG ACGTCGCCGA TCCGATGCTC GAGCTCGCGA TCGCGCAACA GCCCGGCGAG CGTTTCAACG CATTCCAGCG GCAACTGATC GACGAAATGG CGACGAGCTT CGGTTACTGA
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Protein sequence | MTKTAFFTDE RTFWHTGGAH ALFFPVGGWV QPPSSAGYAE SPDSKRRLLS LVHASGLAAK LDMSSAPAAT DDDLRRIHPA HYLDAFKRAS DAGGGDLGEL APFGRGSYEI AALSAGLALA AVDAVLAERT ANAFSLSRPP GHHCLRDKPM GFCLLANIPI AIEAARAKHR VERVAVIDWD VHHGNGTQSI YYDDPNTLTI SLHQDRCFPP GYSGADERGA GAGAGSNVNV PLLAGAGDDA YRYAFERIVL PALDAFRPEL VIVASGLDAN AVDPLARMQL HSDSYRYMTH ALKQAAQRHC GGRLVIVHEG GYSEAYVPFC GHAIVEALAG MRTDVADPML ELAIAQQPGE RFNAFQRQLI DEMATSFGY
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