| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2277 |
|---|
| Symbol | |
|---|
| ID | 4902390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 2262823 |
|---|
| End bp | 2263770 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640135506 |
|---|
| Product | putative formyltransferase |
|---|
| Protein accession | YP_001066541 |
|---|
| Protein GI | 126452558 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGC GCGCCGTCGT CTTCGCGTAT CACAACGTCG GCGTGCGCTG CCTGCAGGTA
CTGCTCGCGC GCGGCGTGGA CGTCGCGCTC GTCGTCACGC ACGAAGACAG CCCGACCGAG
CACATCTGGT TCGGCAGCGT CGCGGCGGTC GCGGCCGAGC ACGGCATCGC GGTCATCACG
CCCGCCGATC CGGCCGGCGC CGACGTGCGC GCGGCGCTCG CGAGCGCGAA GCCCGATTTC
ATCTTCTCGT TCTATTACCG GCACATGCTG CCCGTCGACC TCCTCGCGCT CGCCGCGCGC
GGCGCGTACA ACATGCACGG CTCGCTGCTG CCGAAGTACC GCGGCCGCGT GCCGACGAAC
TGGGCGGTGC TCAACGGCGA GACCGAAACC GGCGCGACGC TGCACGAAAT GGCCGCGAAG
CCCGATGCGG GCGCGATCGT CGGGCAGACC GCGGTGCCGA TCCTGCCCGA CGACACCGCC
GCGCAGGTGT TCGACAAGGT CACCGTCGCC GCGGAGCAGA CGCTCTGGCG CGTGCTGCCC
GCGCTGCTCG CGGGCGAAGC GCCGCACCTG CCGAACGATC TGTCGCAGGG CAGCTACTAC
GGCGGGCGCA AGCCCGAGGA CGGGCGCATC GACTGGACGC AGCCGGCCGC GAACGTGTAC
AACCTGATCC GCGCGGTCGC GCCGCCGTAT CCGGGCGCGT TCACCGATCT CGGCGGCACG
CGCTTCGTGA TCGCGCGCGC GCGGCTCGCC GCGCCCGGCA CGGCCGCCGC GCGCGCGGCC
GTCGATTTGC CGCCGGGCCT GCACGTAAGC GATAATGCGC TGTTCGGCGT TTGCGGCGAC
AGCCGCGCCG TCTCCATTCT CGAACTGCGC CGGCCGCACG ACGGCGGCGA AGCCGTCGTT
TCCCCGGCGC AATTCGCGCA GTTCATTCAT TCTTCCCGTC ATTCATGA
|
|---|
| Protein sequence | MKPRAVVFAY HNVGVRCLQV LLARGVDVAL VVTHEDSPTE HIWFGSVAAV AAEHGIAVIT
PADPAGADVR AALASAKPDF IFSFYYRHML PVDLLALAAR GAYNMHGSLL PKYRGRVPTN
WAVLNGETET GATLHEMAAK PDAGAIVGQT AVPILPDDTA AQVFDKVTVA AEQTLWRVLP
ALLAGEAPHL PNDLSQGSYY GGRKPEDGRI DWTQPAANVY NLIRAVAPPY PGAFTDLGGT
RFVIARARLA APGTAAARAA VDLPPGLHVS DNALFGVCGD SRAVSILELR RPHDGGEAVV
SPAQFAQFIH SSRHS
|
|---|
| |