| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2233 |
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| Symbol | rumA |
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| ID | 4900034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2222042 |
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| End bp | 2223439 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640135462 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_001066497 |
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| Protein GI | 126455291 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.206864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAAG CCGTCCCCCT CTCCACGCGC CGCGCATCGT CCGCGGGCGA CGCGCCCGGT
CGCGCCCCGG TTCTCGATAT CGATTCGCTC GACATGGAGG CGCGCGGCGT CGGCCGCGTC
GTCGACGAAA ACGGCGAGCC CGGCAAGGTG ATTTTCGTCG AGGGCGCGTT GCCCGGCGAG
CGCGTCACTT ATTCGAGCTT TCGCCGCAAG CCGACCTACG AGCAGGCGCA GGTCGTCGAT
ATTCTGCGCC CGAGCGTGAT GCGCACGCAG CCGAAATGCG CGTTTTTCGG CACGTGCGGC
GGCTGCTCGA TGCAGCATCT CGACATGCGC GCGCAGGTCG CGATCAAGCA GCGCGTGCTC
GAGGATAACC TCTGGCATCT CGCGAAGCTG CGCGCCGAGG CGATGTTCGC GCCGATTCAC
GGGCCGTCGT GGGGCTATCG CTATCGTGCG CGCCTCACCG TGCGCCATGT CGAGAAGAAG
GGCGGCGTGC TCGTCGGCTT CCACGAGAAA AAGAGCAGCT ACGTGGCCGA CATGACGAGC
TGCGAAGTGC TGCCGCCGCA CGTGTCGGCG ATGCTCGTGC CGCTGCGCCG GCTGGTCGAG
CAATTATCGA TCCGCGATCG CATGCCGCAG ATCGAGCTCG CGGTCGGCGC CCGGGTGACG
GCGCTCGTGC TGCGCGTGCT CGAGCCGATC AACGCGGCCG ACGAGGCGCT CCTGCGCGAA
TTCGCCGACA CGCATCGCGT GCAGTTCTGG CTGCAGCCGA AAGGGCCGGA TACGGTCGCG
CCGTTCTATC CGCTTGACGC GCAGCTCGAT TACACGCTGC CGGAATTCGG GATCCGGATG
CCGTTCAAGC CGACCGATTT CACGCAGGTC AATCACCAGA TCAACCGCGT GCTCGTCGGC
CGCGCGCTGC GGCTACTCGC GCCCGAACGC GGCGATCGCG TGCTCGATCT GTTCTGCGGG
ATCGGCAACT TCACGCTGCC GCTCGCGCGG CTCGCACGCG AAGTGGTCGG CATCGAGGGC
AGCGACGCGC TGACTGCGCG CGCGCTCGAG AATGCGAAGG AAAACGGCGT CGACGGCCAT
ACGTCGTTCG CGTGCCGTAA CCTGTTCGAG GTGACGGCGG ACGATCTGCG CGCGCTCGGC
GCATTCGACA AGTTCCTGGT CGATCCGCCG CGCGAAGGCG CACTCGCGGT ATCGAAGGCG
CTCGCCGAGA TCGCGCAGAG CGGCGCGGGG CCGTTGCCTG CGCGGATCGT GTACGTGTCG
TGCAACCCGT CGACGCTCGC GCGAGACGCG GGGCTCCTCG TGCACGAGGC GGGTTATCGG
CTCAAGGGCG CGGGCGTCGT CAACATGTTC CCGCATACCT CGCATGTCGA ATCGATCGCG
CTGTTCGAGC GCGATTGA
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| Protein sequence | MSEAVPLSTR RASSAGDAPG RAPVLDIDSL DMEARGVGRV VDENGEPGKV IFVEGALPGE
RVTYSSFRRK PTYEQAQVVD ILRPSVMRTQ PKCAFFGTCG GCSMQHLDMR AQVAIKQRVL
EDNLWHLAKL RAEAMFAPIH GPSWGYRYRA RLTVRHVEKK GGVLVGFHEK KSSYVADMTS
CEVLPPHVSA MLVPLRRLVE QLSIRDRMPQ IELAVGARVT ALVLRVLEPI NAADEALLRE
FADTHRVQFW LQPKGPDTVA PFYPLDAQLD YTLPEFGIRM PFKPTDFTQV NHQINRVLVG
RALRLLAPER GDRVLDLFCG IGNFTLPLAR LAREVVGIEG SDALTARALE NAKENGVDGH
TSFACRNLFE VTADDLRALG AFDKFLVDPP REGALAVSKA LAEIAQSGAG PLPARIVYVS
CNPSTLARDA GLLVHEAGYR LKGAGVVNMF PHTSHVESIA LFERD
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