| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2171 |
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| Symbol | |
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| ID | 4902431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2155755 |
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| End bp | 2157164 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135400 |
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| Product | putative sensory box sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_001066435 |
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| Protein GI | 126452610 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAT TGGCAGCCAA CGCGGCCGCG GGCCGCGCAG CCGGAGCTCC ATGCATGAAT
CAGCGCGACG CCATTCCGAT CGTTCCCATT TCGCCGCCCG ACGTGGGCGT GCTCGTGTCG
TACCTCGAGC AGGATCCGCA GCCGATGATC GTGCTCGATC CGTCGTACCG GATCCTCGCG
GCGAACGCCG CGTATCAGCG GCAGTTCGGC ATCGCCGGCG AGGCGCACGT CGGGCGGCGC
TGCTACCAGG TCTCGCATCA CTACGACATG CCGTGCGACC AGGCGGGCGA GCATTGCCCG
ATGAAGCAGG CGGGCGAATC GCGCGGCCTG AACCGCGTGC TGCACATCCA TCACACGCCG
CGCGGGCCCG AGCACGTCGA TGTCGAGCTG CGGCCGATCT TCGATGCGCG CGGCGCGGTG
ATCGCATACG TCGAGCGGCT GACGACCGTG CGCAGCGCGT CGGCGAAGCC GAGCGGCGAG
GGGCTCGTTG GCGGCTCGGA CGCGTTCAAC GCGGCGCTGT CCGCGTTGCA GCGGGTCGCG
CCTTCGATGC TGCCCGTGCT GCTGCTCGGC GAATCGGGCA CGGGCAAGGA GCTGTTCGCG
CGTGCGTTGC ACGAGGCGAG CGCGCGTGCG ATGGGGCCGT TCGTCGTCGT CGATTGCTCG
GGGATTGCCG AGACGCTGTT CGAAAGCGAG CTGTTCGGCT ACGAGAAAGG CGCGTTCACC
GGCGCGAGCG CGCGCAAGCC CGGCCTCGTC GAGACCGCGC AGGGCGGCAC GCTGTTTCTC
GACGAGATCG GCGACGTGCC GCCGCCGATG CAGGTGAAGC TGCTGCGCCT CATCGAATCG
GGGACGTTCC GGCGGGTAGG CGGCGTCGAG GTGCTGCGCG CGGATTTCCG GCTCGTCGCG
GCGACTCACA AGCCGCTCAA GGAGATGATC GGCGACGGCA GGTTCCGGCA GGACCTGTAC
TACCGGATCA GCGCGTATCC GATTCCGCTG CCCGCCGTGC GCGAGCGCCC GGGCGACATT
CCGCTCCTCG TCGATTCGAT CCTGCGCCGG ATCGCGGCGC TCGTGCCCGC AGCCGGGCAG
CGCTTCGCGG TCGCGCCGGA GGCGCTCGCG CGGCTCGAAG CGTATGCGTG GCCGGGCAAC
ATCCGCGAGC TGCGCAACGT GCTCGATCGC GCGTGCCTGT TCGCCGACGA CGGCGTGATT
CGCGTCGAGC ATCTGCCCGA CGAAGTCGCG TGCGCGGGCG AAGCGCCGGC GGGGCCCGGC
GCGCCGGCGA AGCTGTCCGA CGACGAGCTC GCGCGGATCG CGCGCGCGTT CGACGGCACG
CGGCGCGCGC TCGCCGAGCG CGTCGGGATG AGCGAGCGCA CGCTGTACCG GCGGTTGCGC
GCGCTGGGGA TCGCGACGCG GGAGGCGTGA
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| Protein sequence | MAELAANAAA GRAAGAPCMN QRDAIPIVPI SPPDVGVLVS YLEQDPQPMI VLDPSYRILA
ANAAYQRQFG IAGEAHVGRR CYQVSHHYDM PCDQAGEHCP MKQAGESRGL NRVLHIHHTP
RGPEHVDVEL RPIFDARGAV IAYVERLTTV RSASAKPSGE GLVGGSDAFN AALSALQRVA
PSMLPVLLLG ESGTGKELFA RALHEASARA MGPFVVVDCS GIAETLFESE LFGYEKGAFT
GASARKPGLV ETAQGGTLFL DEIGDVPPPM QVKLLRLIES GTFRRVGGVE VLRADFRLVA
ATHKPLKEMI GDGRFRQDLY YRISAYPIPL PAVRERPGDI PLLVDSILRR IAALVPAAGQ
RFAVAPEALA RLEAYAWPGN IRELRNVLDR ACLFADDGVI RVEHLPDEVA CAGEAPAGPG
APAKLSDDEL ARIARAFDGT RRALAERVGM SERTLYRRLR ALGIATREA
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