| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2164 |
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| Symbol | |
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| ID | 4902251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2149873 |
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| End bp | 2151777 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640135393 |
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| Product | NodT family efflux transporter outer membrane lipoprotein |
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| Protein accession | YP_001066428 |
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| Protein GI | 126452102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTT CGATTCCTTC GCTCCCGAGT CTCGCGCCGC GCGCGCTCGC CGCGGCCGCC
GCCATCGCGT TCGCGGGCGC GCTCGCCGGC TGCTCGCTGT TCGCGCCGAG CGACGCGCCG
CCCGCGATGC CGTCGCCCGC GCACTACGGC GCGACACCGC TGCCCGAGCG CACGGCCGCC
GCGCAGGGGC TCGCGCAACG CTTTGACGTG GGCGCGCAGC CGGTGCCCGA CTGGTGGAAG
CGCTATCGCT CGCCCGCGCT CGACGCGCTC GTCGACGAAG GGCTGCGCAA CAGCCCGACG
CTCGCCGCCG CCGAAAAGAG CCTGAGCGCC GCGCGCGAAC AGTTGCGCGC GCAGATCGGC
AGCTCGCTGC TGCCGACGAT CGACGCCGGC GGCCAGGCGA CGCGCGAGCG CGCGCTCGGC
ATGCCGGCGT TCGGCCCGCA GACGGTGCTC TACAACGTGT TCGCGGGCCA GTTGCAGGCG
AGCTACACGC TCGATCTGTT CGGCGCCGCG CGTTTCGCGA ACCGCGCGCT GTCCAAGCGC
GTCGACGTGA ATGCGTACCA GCTCGAATCC GCGCGGCGCG CGCTCGCCGC GAACATCGTG
ACGGCCGCCG TCACATCGGC CGCGCTCGCC GAGCAGGTCG CGACGACCGA GCGGCTCGTC
GCGCTCGCGC GCGAACAGGC GAGCGACGCG GCCGCGCGCC ACCGGCTCGG CGCGGCGTCG
CGCACCGACA TGCTGAACAC GCGGCAAAGC GCGGCGGCGC TCGAGGCGAG CCTGCCCGCG
CTGCGCCAGC AAGCGCAGAG CGCGCGCCAT GCGCTTGCCG TGCTGCTCGG CCGCACGCCG
GATGCCGCGC CCGCGAATCT CGCGCTCGCC GATCTGCATC TGCCGCAGGA CGTGCCGGTC
GTCGTGCCGT CGACGCTGCT GCAGGCGCGG CCCGACATCC GCGCGGCCGA GGCCGGCTTG
CAGGCTGCGG CGGCCGAGGT CGGCGTCGCG ACCGCGCAGA TGTTCCCGCA GTTGTCGCTG
TCCGCGTCGA TGGGCCATGC GGGCTTCAAG TGGCCGGCGA TGCTGTCGGG CGCGGGCGCG
ATCTGGAGCG TCGGTGCATC GCTCACGCAG CCGCTCTTTC ACGGCGGCGC GCTGCTCGCG
CAGCGCCGCG CGGCGCGCGC GAGCTACGAC GCGGCCGTCG ACCAGTACAA GCAGACGGTG
CTCGCCGCCT TCCAGGATGT GGCCGACAAG CTCGCCGCGC TCGAGAACGA CGCGAGCGCA
CTCGACGCGT CGAACCGCTC GGCCGTCGCC GCGCGCGGCG CGTTCGACGA CACCGCGGCG
CGCGTGCGGC TCGGCGCGCT GCCGCCGTCG GCCGCTCGCG CGAGCGAGCA GCAGTACCGC
AACGCGCGGC TCGACGAGAT CCGCGCGACG GGCACGCGGC TTGTCGATAC CGCGCGGCTC
TTTCAAGCGA TGGGCACGCC GATCGACGGC GGGCCGGATG CGCGGCGTGT GGGCGGTATG
AGCGGCTCGA ATGATGTGAG TGACGTAAGT GGATCGAGTG GTGTCGGCGG TGCGCACCGC
GTGATCGACA TACACGAAGC CGGTGCGGCG CAGCGTGCGG ACGACGCGAA GCGGACCGGC
GACGCGCGCA TGCTTCGCGC GAACGGCAAG ACCGAGGCGG CGCAAGCTTC CGTGACGGCG
AGCGCGGCCG CCGATGCGCC GGCCGCGCCC GCCCCGGCGG CTGCCGCCAG CGGCGCGAAC
GCGATACGGA TACAGGCGCG AACGCCACCG ACCGCCGGCC TGTCCGCCGG CGCGATCGAC
GGCCCGATCG ATGCGGCAAG CGCAACCGGC GCGACGAGCA CGGCCCGCCC GGCAAACGGG
CGCGACACGA CGGTCGAATC GAACCCAACG CATTCGCCGA GCTAA
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| Protein sequence | MRVSIPSLPS LAPRALAAAA AIAFAGALAG CSLFAPSDAP PAMPSPAHYG ATPLPERTAA
AQGLAQRFDV GAQPVPDWWK RYRSPALDAL VDEGLRNSPT LAAAEKSLSA AREQLRAQIG
SSLLPTIDAG GQATRERALG MPAFGPQTVL YNVFAGQLQA SYTLDLFGAA RFANRALSKR
VDVNAYQLES ARRALAANIV TAAVTSAALA EQVATTERLV ALAREQASDA AARHRLGAAS
RTDMLNTRQS AAALEASLPA LRQQAQSARH ALAVLLGRTP DAAPANLALA DLHLPQDVPV
VVPSTLLQAR PDIRAAEAGL QAAAAEVGVA TAQMFPQLSL SASMGHAGFK WPAMLSGAGA
IWSVGASLTQ PLFHGGALLA QRRAARASYD AAVDQYKQTV LAAFQDVADK LAALENDASA
LDASNRSAVA ARGAFDDTAA RVRLGALPPS AARASEQQYR NARLDEIRAT GTRLVDTARL
FQAMGTPIDG GPDARRVGGM SGSNDVSDVS GSSGVGGAHR VIDIHEAGAA QRADDAKRTG
DARMLRANGK TEAAQASVTA SAAADAPAAP APAAAASGAN AIRIQARTPP TAGLSAGAID
GPIDAASATG ATSTARPANG RDTTVESNPT HSPS
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