Gene BURPS1106A_1953 details

Gene Information

• Locus tag: BURPS1106A_1953
• Symbol: cobW
• ID: 4900607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1918963
• End bp: 1920036
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640135183
• Product: cobalamin biosynthesis protein CobW
• Protein accession: YP_001066218
• Protein GI: 126451969
• COG category: [R] General function prediction only
• COG ID: [COG0523] Putative GTPases (G3E family)
• TIGRFAM ID: [TIGR02475] cobalamin biosynthesis protein CobW

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.891813
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGATGC GCAAAATTCC CGTGACGATC GTCACGGGCT TCCTCGGCAG CGGCAAGACG 
ACGCTCTTGC GCCACATCCT CCAGCACGCG GGCGGCCGCC GGATCGTCGT GATCGTCAAC 
GAGTTCGGCG AACTCGGCAT CGACGGCGAG ATCCTGAAGG GCTGCGGCGT CGGCTGCGAC 
GAAGCCGGCC GCGAAGTCGA CGGCCGGCTC TACGAGCTCG CGAACGGGTG CCTGTGCTGC 
ACCGTGCAGG AAGAGTTCTA TCCGGTGATG GAGCAGCTCG TCGAGCGCCG CGCGCACATC 
GATCACGTGC TGATCGAGAC CTCCGGCCTC GCGCTGCCCA AGCCGCTCGT GCAGGCGTTC 
AACTGGCCGT CGATCAAGAA CGGCTTCACG GTCGACGCGG TGCTGACCGT GGTCGACGCG 
CCCGCCACCG CGCGCGGCCA GTTCGCCGAG CACCCCGCCG CCGTCGACGC GCAGCGCCGC 
GCGGACCCGA ATCTCGATCA CGAATCGCCG CTGCACGAGC TGTTCGCCGA TCAGCTGTCG 
TCCGCCGATC TCGTGATCGT CAACAAGACC GATCTGCTCG ACGACGCGGC GCTCGCCGCC 
GTCGAGGCGA CGATTCGCGA CGAAGTCCCG CCGCAGGTGA AGCTCGTGCG CGCGCGGCGC 
GGCGAGCTCG ATCTCGCGAC GCTGCTCGGG CTGAACGCCG CGTCCGAGGA GACGATCCAT 
CTGCGGCACG ATCATCACGG CTCGGCCGAC GACGCCGATC ACCATCACGA CGAGTTCGAC 
TCGGTCGTCG TCGAGGCGCG GGTGAGCTCG CGCGAGGCCG CGCTCGGCGC GCTCGGGGCG 
CTCGTCGAGG CGCACGCGAT CTATCGCGTG AAGGGCTTCG CCGCGTTGCC GGGCGTGCCG 
ATGCGGCTCG TCGTGCAGGG CGTCGGCCGG CGCTTCGACA GCTATTTCGA CCGCCGCTGG 
CGCGACGGCG AGGCGCCCGC GAGCCGCTTC GTGCTGATCG GCGAGGACCT CGACGCGGCC 
GCGCTGCAGC GCGCGTTCGA CGCGGCGCTC GCCGCGCACG GGCAGGCCGC GTGA 

 

Protein sequence

MQMRKIPVTI VTGFLGSGKT TLLRHILQHA GGRRIVVIVN EFGELGIDGE ILKGCGVGCD 
EAGREVDGRL YELANGCLCC TVQEEFYPVM EQLVERRAHI DHVLIETSGL ALPKPLVQAF 
NWPSIKNGFT VDAVLTVVDA PATARGQFAE HPAAVDAQRR ADPNLDHESP LHELFADQLS 
SADLVIVNKT DLLDDAALAA VEATIRDEVP PQVKLVRARR GELDLATLLG LNAASEETIH 
LRHDHHGSAD DADHHHDEFD SVVVEARVSS REAALGALGA LVEAHAIYRV KGFAALPGVP 
MRLVVQGVGR RFDSYFDRRW RDGEAPASRF VLIGEDLDAA ALQRAFDAAL AAHGQAA