| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1905 |
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| Symbol | oprA |
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| ID | 4899582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1860132 |
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| End bp | 1861682 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640135135 |
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| Product | outer membrane efflux protein OprA |
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| Protein accession | YP_001066170 |
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| Protein GI | 126455205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCGA TGATGAAACC CCGGGCCCGG CGGCGCGGCG CGCGCGCAGC GCGGCGGCCG
AACGGGCCGC GGGCCTGGCC GCTCGCGGTC GCGGCCGCGC TCGTCGCGGG CTGCACGCTC
GCGCCGCGCT ACGAGCGGCC GGCCGCGCCC GTGCCGGCGC ATTATTGGTC GACGGCGACG
GGCGCGCCGC GCGAGGCGGG CCCGGCGGCC GCCGGCGGCC CGCGCGCGAT GCCGGACGCG
CGCCGCGGCG ACGCCGGGCG CGACGCCCGC GACGCGCGGC TCGACGACTG GCGCGCGTAT
TTCACCGATC CGGCGCTGCG CGCGCTGATC GACGCGGCGC TCGCGAACAA TCGCGACCTG
CGGATCGCGA CGCTGCGTAT CCAGGAAGCG CGCGGCCTCT ACGGCGTCGC GCGCGCGGAC
CGGCTGCCGT CGATCGACGG CAGCCTCGGC TACGAGCGCA CGCGGCTTTA CGACCCGGTG
CTGCGCGAGA GCGCGACGAG CTCGCTGTAT CGCGCGAGTG TCGGCGTGAG CGCGTTCGAG
ATCGATCTGT TCGGCCGCGT GAAGAGCCTC TCGGACGCGG CGCTCGCCGA GTACTTCGCG
ACCGCCGAGG CGCAGCGCGC GGCGCGCATC AGCCTGATCG CCGAAGTCGC GTCCGCGTAC
GTGACCGAGC GCGCGCTCGT CGATCAACTG GGGCTCGCCG AACGCACGCT CGCCGCGCGC
GACGCGGCCT ACGCGCTCAC GCAGCGCCGT TACGCGGCCG GCACGAGCAC GGCGATCGAG
CTGCGCACGG CCGAGATGCT CGTCGCGTCG GCGCGCGCGT CGAAGGCGGC GCTCGAGCGC
GAGCACACGC AGGCGGCGAG CGCGCTGAAG TTGCTCGCGG GCGACTTCAT GACGGCGCTG
CCCGCCGATG CGCCCGCGCT CGACGCGCTC GCGGTGGCGC GGGTGTCGCC GGGGCTGTCG
TCGGATCTGC TCGAGCAGCG CCCGGACATC CGGCAGGCCG AGCAGCGCCT CGTCGCGGCG
AACGCGAACA TCGGCGCGGC GCGCGCGGCG TTCTTCCCGC GCATCGCGCT CACGACCGAC
GTCGGCTCGG TGAGCGACGC GTTCTCGGGA CTCTTCTCGG CCGGCTCGAG CGTGTGGACG
TTCGCGCCGC GGCTCACGCT GCCGATTTTC GCGGGCGGGC GCAATCGTGC GAATCTCGAC
GTGGCGGACG CGCGCAAGCA TATCGCGGTC GCCGAATACG AGAAGACGAT CCAGACGGCG
TTTCGCGAAG TCGCCGATGC GCTCGCGGCG CGCGATCAGA TCGACGCGCA GCTTGCCGCG
CAGCAGGCGG TCTACGGTGC GGACGCGGAG CGGCTGCGGC TTGCGCAGCG GCGCTACGAC
AGCGGCGTGG CGAGCTATCT CGAGCTGCTC GACGCGCAGC GCAGCACGTT CGAGTCCGGG
CAGGAGCTGA TTCGCCTGAA GCAACTGCGG CTCACGAACG CGATCACGCT GTATCGCGCG
CTGGGCGGGG GCTGGTCGCG CGCCGGGTGC GGCGGCGATG GGTGTGCTTG A
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| Protein sequence | MKAMMKPRAR RRGARAARRP NGPRAWPLAV AAALVAGCTL APRYERPAAP VPAHYWSTAT
GAPREAGPAA AGGPRAMPDA RRGDAGRDAR DARLDDWRAY FTDPALRALI DAALANNRDL
RIATLRIQEA RGLYGVARAD RLPSIDGSLG YERTRLYDPV LRESATSSLY RASVGVSAFE
IDLFGRVKSL SDAALAEYFA TAEAQRAARI SLIAEVASAY VTERALVDQL GLAERTLAAR
DAAYALTQRR YAAGTSTAIE LRTAEMLVAS ARASKAALER EHTQAASALK LLAGDFMTAL
PADAPALDAL AVARVSPGLS SDLLEQRPDI RQAEQRLVAA NANIGAARAA FFPRIALTTD
VGSVSDAFSG LFSAGSSVWT FAPRLTLPIF AGGRNRANLD VADARKHIAV AEYEKTIQTA
FREVADALAA RDQIDAQLAA QQAVYGADAE RLRLAQRRYD SGVASYLELL DAQRSTFESG
QELIRLKQLR LTNAITLYRA LGGGWSRAGC GGDGCA
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