Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1891 |
Symbol | |
ID | 4902569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1847759 |
End bp | 1848760 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640135121 |
Product | TPR repeat-containing protein |
Protein accession | YP_001066156 |
Protein GI | 126454065 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTCG CGCTGCTGCT CGCCGCGCTG CTCGCCGGCT GCGCGAGCCA CGGCGTGTTT CAGCCGCGGC CGGTGCTGTC GCAGCGCGGC ACGGTCGGCG ACGGCGATCT GAGCGTCGCC GAGAGCGCGC TCGCGGCCGG CGACGCGGAG CTCGCCGCGA CGCTCTTCGA GCGCGCGCTG AAGGCCGATC CGCGCTCGCT TCCCGCTCAG GTGGGGCTCG GCGACGCGAT GTACCAGACA GGCGAGCTCG CGCGCGCGGG CGTGCTCTAC GCGCAGGCGG CCGCGGCCGC GCCGGACGAT CCGCGCGCGC AACTGGGCCT TGCGCGCGTC GCGCTGCGCG AGCGGCATCT CGACGACGCG CTCGCGCGCT ACGCGAAGCT GAACGCCGCG CGTCCGGACA ACATCGCGGC GGCCGCCGGC CTCGGCACGG TGCTGGATCT GCTCGGCCGG CACGACGACG CGCAACGCGT GTATCGCGCC GCGCTCGCGC GGCATCCGGA CGCGCATGCG CTGAAGACCG ACCTCGGCCT GTCGCTCGTG CTCGCGGATC GTGCGCGCGA GGGCGCGAAC GTGCTGCTCG ACATCGCGGG GCTGCCGAAC GCGCCCGCGC AGGCGCGCGA GGACCTCGCG CTCGCATACG GGATGCTCGG CAACGACGAT GCGGCAAAGC GCATCCTCGT TCACGATCTG CCGGCCGCGT CGGCGGAGGA CAACCTGCGC TTCTACCGGA ACGTGCGCGC GCGGCGCGCG GCGGGAGCGG GGGGCGGCGG CGCACCGGGG CCGGCGGGCG CGGCAGGTGC GACAAATGCG GCAAATGCGG CAAATGCGGC AAATGCGGCA AATGCGGCAA ATGCGGCAAA TGCGGCGGCC GGGCCGACCA TGACGACTGC GGCGAACGCG CCTCGCGCGG AGCACGCGGC GGCCGCCCCG CAGGCGCCTT ACGCGGGGCG CGCGATCGCC GACGCCGGCC TCGCGCCCGT GCGCGTTGAG GTCGTCAAAT GA
|
Protein sequence | MPVALLLAAL LAGCASHGVF QPRPVLSQRG TVGDGDLSVA ESALAAGDAE LAATLFERAL KADPRSLPAQ VGLGDAMYQT GELARAGVLY AQAAAAAPDD PRAQLGLARV ALRERHLDDA LARYAKLNAA RPDNIAAAAG LGTVLDLLGR HDDAQRVYRA ALARHPDAHA LKTDLGLSLV LADRAREGAN VLLDIAGLPN APAQAREDLA LAYGMLGNDD AAKRILVHDL PAASAEDNLR FYRNVRARRA AGAGGGGAPG PAGAAGATNA ANAANAANAA NAANAANAAA GPTMTTAANA PRAEHAAAAP QAPYAGRAIA DAGLAPVRVE VVK
|
| |