Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1878 |
Symbol | |
ID | 4899974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1835273 |
End bp | 1836319 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640135108 |
Product | ABC transporter substrate binding protein |
Protein accession | YP_001066143 |
Protein GI | 126452998 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.314195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCG CATCGTCTCT CGGCCGACGC TCGCTCTCGC TTACCGCCGC GCTGGCCGTG CTGGTCGCGG CGCTCGCCGC CGCATCGTTG GTCGCCGCGC CCGCGGCGCG CGCCGAAGGG CGCATTCGGG TCGCCGAGCA GTTCGGCATC GTCTACCTGC TGCTGAACGT CGCGCGCGAT CGGCATCTGA TCGAGCAGGC GGGACGCGCC GAGGGCATCG CGATCGATGT CGACTGGGTC AAGCTCTCGG GCGGCGCGGC GATCAACGAT GCGCTCCTGT CCGGCTCGAT CGACATCGCG GGCGCGGGCG TCGGGCCGCT CCTGACGATC TGGGACCGCA CGCGCGGCCG GCAGAACGTG AAGGGTGTCG CGTCGCTCGG CAATTTGCCG TATTACCTCG TCAGCAACGA TCCGCGCGTG AAGACGATCG CCGATTTCAC CGCGCGCGAG CGCATCGCGG TGCCGGCGGT GACGGTATCG GTGCAATCGC GCCTGCTGCA GTTCGCGGCC GCCCAGCGTT GGGGCGATCG TGCGTACGAC CGGCTCGACA AGCTGACGCA GGCCGTCGCG CACCCGGACG CGGCGGCCGC GATCATCGCG GGCCGCACCG AGCTCACCGC GCACTTCGGC AATCCGCCGT TCCAGGAGCA GGAACTCGCG GCCAATCCGA ACGCGCACAT CGTGCTGAGT TCGTACGACG TGCTCGGCGG GCCGAGCTCG GCGACGGTGC TGTACGCGAC CGAGCGATTC CGCCGCGACA ATCCGAAGAC CTACCGCGCG TTCGTCGCCG CGCTCGGGCA GGCGGCGCGC TATGTGCAGA CGAACCCGGA GGGCGCGGTC GACGCGTATC TGCGCGTGAA CGGCTCGAAG GCCGATCGCG CGCTGCTGCT GAAAATCGTC AGGAATCCGC AGGTGCAGTT CAGGATCGCG CCGCAGAACA CGTTCGCGCT CGCGGCGTTC ATGCACCGCG TCGGCGCGAT CCGCCACGAG CCGAAGACGT GGCGCGACTA TTTCTTCGAC GATCCGGCGA CCGCGCAGGG CAGTTGA
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Protein sequence | MTRASSLGRR SLSLTAALAV LVAALAAASL VAAPAARAEG RIRVAEQFGI VYLLLNVARD RHLIEQAGRA EGIAIDVDWV KLSGGAAIND ALLSGSIDIA GAGVGPLLTI WDRTRGRQNV KGVASLGNLP YYLVSNDPRV KTIADFTARE RIAVPAVTVS VQSRLLQFAA AQRWGDRAYD RLDKLTQAVA HPDAAAAIIA GRTELTAHFG NPPFQEQELA ANPNAHIVLS SYDVLGGPSS ATVLYATERF RRDNPKTYRA FVAALGQAAR YVQTNPEGAV DAYLRVNGSK ADRALLLKIV RNPQVQFRIA PQNTFALAAF MHRVGAIRHE PKTWRDYFFD DPATAQGS
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