| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1723 |
|---|
| Symbol | |
|---|
| ID | 4900530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1682885 |
|---|
| End bp | 1683430 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640134953 |
|---|
| Product | sensory box transcriptional regulator |
|---|
| Protein accession | YP_001065994 |
|---|
| Protein GI | 126454121 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA TCGATTACAA GACCGCCTTC CATCTCGCGC CGATCGGCCT CGTGCTGTCG
CGCGACCGCG TCATCGAGGA TTGCAACGAC GAACTCGCCG CGATCTTCCG CTGCGCGCGC
GCCGATCTGA TCGGCCGCTC GTTCGAAGTG CTCTACCCGT CGTCGGACGA ATTCGAGCGG
ATCGGCGAGC GGATCTCGCC CGTGATGATC GCGCACGGCA GCTATGCGGA CGATCGCATC
ATGAAGCGCG CGGGCGGCGA GCTGTTCTGG TGCCACGTGA CGGGCCGCGC GCTCGATCGT
ACGGCGCCGC TCGCGGCGGG CGTGTGGACG TTCGAGGACC TGAGCGCGAC GCGGCGCGTC
GCGGTCGAGC TGACGCCGCG CGAGCGCGAG ATCGCCGCGC AGCTCGTGAC GGGCAAGACG
AGCAAGCAGA TCGGCCGCGT GCTCGACATC AGCTCGCGCA CGGTCGACAT CTATCGCGCG
CGGCTGATGC GCAAATACGG AACCGGCAAC ACGGCGGAAC TGCTGCAGCG CCTGCTCGGA
CAGTGA
|
|---|
| Protein sequence | MPAIDYKTAF HLAPIGLVLS RDRVIEDCND ELAAIFRCAR ADLIGRSFEV LYPSSDEFER
IGERISPVMI AHGSYADDRI MKRAGGELFW CHVTGRALDR TAPLAAGVWT FEDLSATRRV
AVELTPRERE IAAQLVTGKT SKQIGRVLDI SSRTVDIYRA RLMRKYGTGN TAELLQRLLG
Q
|
|---|
| |