| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1658 |
|---|
| Symbol | |
|---|
| ID | 4900411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1609832 |
|---|
| End bp | 1611052 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640134888 |
|---|
| Product | CAIB/BAIF family protein |
|---|
| Protein accession | YP_001065929 |
|---|
| Protein GI | 126455081 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0837995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCCC TCAGCCACAT CCGCGTCCTG GACCTGAGCC GCGTGCTCGC GGGCCCGTGG
TGCGCGCAGA CGCTTGCCGA TCTCGGCGCC GACGTGATCA AGGTCGAGCG CCCGGAGTGC
GGCGACGACA CCCGGCACTG GGGCCCGCCG TACCTGAAGA CGCCGGACGG CGCCGACACC
CGCGAAGCCG CGTACTACCT CGCCGCGAAC CGCAACAAGC GCTCGGTGAC GGTCGATATC
GCGACGCCCG AGGGCCAGCG GATCATCCGC GAGCTCGCCG CGCAATGCGA CGTCGTGCTC
GAGAACTACA AGGTCGGCCA GCTCGCGAAA TACGGGCTCG ACTACGCGTC GCTCGCGGCC
GTGAAGCCCG GCCTCGTCTA TTGCTCGGTG ACGGGCTTCG GCCAGACGGG CCCGTACGCG
CACCGCGCCG GCTACGACTT CATCATCCAG GGGATGGGCG GCTTCATGAG CATCACCGGC
GAGCGCGACG GCCTGCCGGG CGGCGGCCCG CAGAAGGCGG GCGTCGCGAT CGCCGATCTC
GCGACGGGCC TGTACTCGAC GATCGCGATC CTCGCCGCGC TCGCGCACCG CGACCGCACG
GGCGAAGGCC AGCACATCGA CATGGCGCTC CTCGACGTGC AGGTGGCGCT CCTCGCGAAC
ATGAACACGA ACTTCCTCGC GAGCGGCAAG CCGCCCGTGC GCTGGGGCAA CGCACATCCG
AACATCGTGC CGTACCAGAC GTTCGAGACG AGCGACGGCT GGATCATCGT CGCGGTCGGC
AACGACGGCC AGTTCCGCAA GTTCGTCGAG GCGGGCGGGC GCCCCGAGCT CGCCGACGAC
GAGCGCTTCG CGACGAACCC CGCGCGCGTG CGCCACCGCG ACACGCTCGT GCCGATCGTC
GCCGCGATGA CGAAGACGCG CACGAAGCGC GAGTGGCTCG ACGCGCTCGA GGCGCTCGGC
GTGCCGTGCG GACCGATCAA CGACCTCGCC GAAGTGTTCG ACGACGAGCA GGTGCGCGCG
CGCGGCATGC AGGTCGATTT GCCGCATCCG AGCGGCGCGA GCGCGAAGCT CGTGCGCAAT
CCGATCCGGA TGAGCGCGAC GCCGCCCGAC GCGCGCAGCG CGCCGCCGCT GCTCGGCGAG
CACACGGACG CGGTGCTGCG CGACCTGCTG GGTTACGGCG ACGCGGCGAT CGCCGCGCTC
AGGGACAAGC GCGTCGTCTG A
|
|---|
| Protein sequence | MGALSHIRVL DLSRVLAGPW CAQTLADLGA DVIKVERPEC GDDTRHWGPP YLKTPDGADT
REAAYYLAAN RNKRSVTVDI ATPEGQRIIR ELAAQCDVVL ENYKVGQLAK YGLDYASLAA
VKPGLVYCSV TGFGQTGPYA HRAGYDFIIQ GMGGFMSITG ERDGLPGGGP QKAGVAIADL
ATGLYSTIAI LAALAHRDRT GEGQHIDMAL LDVQVALLAN MNTNFLASGK PPVRWGNAHP
NIVPYQTFET SDGWIIVAVG NDGQFRKFVE AGGRPELADD ERFATNPARV RHRDTLVPIV
AAMTKTRTKR EWLDALEALG VPCGPINDLA EVFDDEQVRA RGMQVDLPHP SGASAKLVRN
PIRMSATPPD ARSAPPLLGE HTDAVLRDLL GYGDAAIAAL RDKRVV
|
|---|
| |