Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1651 |
Symbol | |
ID | 4902217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1603687 |
End bp | 1605786 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640134881 |
Product | glycosy hydrolase family protein |
Protein accession | YP_001065922 |
Protein GI | 126452022 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.639122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAC GTGAATGCCG CGGGAATGCG CGCGGCAAGG ATTCGGTGAA GATGCGCAAG AAAAGCTTGG TTCATTTGCC CGTCGCGCTG GCGGTGGCCG CGGCGCTCGG CGCGTGCTCG GGCGACGACG ACGCGACGCT CGAGTCGCGC GCGGACGCGA TCGTCGAACG CATGACGACC CGGCAGAAGG TCGGCCAGAA ACTGATGATG GCGTTCCGGT ACTGGTGCCC CGACGGGCAG CCCGCGTGCA CGGCCGGCAT GACCGAATTT CCCGACGCCG CGCGCGACGC GCTGCGCGAG AACGGCATTG GCGGCGTGAT CCTGTTCTCG AACAACCTGA CGGGCATCGA GCAGACGCGC CGGCTGATCG ACGGCATTCG GGCCGCGCCC GCGGCCGACA GCCCGCTCGG GCTGATGATC GGCATCGACG AGGAGGGCGG CAACGTGTTT CGCCTGCCGC GCGTCGAGGC GAGCGCGTTC GCCGGCAACA TGGCGCTCGG CGCGGCGTAC GAAGCGACGC GGGACGACCG GCTCGCGTAC GACATGGGCC GCGTGCTCGC CGCGGAGATC GCGGCGGTCG GCTTCAACGT GAATTTCGCG CCGGACGTCG ACGTCAACAG CAATCCGCTC AATCCGGTGA TCAACGTGCG CGCGTTCGGC GACGATCCGG CGACGATCGG CCTGCTCGGC CGGCGCATGG TGCAGGGCAT GAAGAGCGAG CGCGTGATCG GCACGTTCAA GCATTTTCCC GGGCACGGCG ACACGGATAC CGATTCGCAC TACGGATTGC CCGTCGTGAT CAAGTCGCGC GCCGACGCCT ACGCGATCGA TCTCGCGCCG TACCGGCAGG CGATCGAAGC GGGCGAGGCG CCCGACATGA TCATGACCGC GCACATCCAG TATCCGTCGC TCGACGACAC CCGCGTCGCG ACCCGCACGG GCGAGCAGAT GATCGCGCCC GCGACGATGT CGCGGCGCAT CCAGCACGAT ATCCTGCGCG GCGAGTTCGG CTATCAGGGC GTGACGATCA CCGACGCGCT CGACATGAAG GGCATCGCCG GCTTCTTCGA CGAGGACGAC GCGGTCGTCA AGGTGTTCCA GGCGGACGTC GACATTGCGC TGATGCCCGT CGAGTTTCGC ACCGCGGCCG ATGCCGGGCG CCTGGCGGCG CTCGTCGATC GCGTCGCCGC GGCGGTCGAT TCGGGGCGGA TCGATCGCGC CGAGTTCGAT CGCTCGGTGC GCCGTATCGT GCTGACGAAG CTGCGCCACG GCATCGTCGC GTCGGATCGC GGCCGGCCGG TCGACGAGCT GGCATCGATC GGCGGGCCCG CGCACCGCGC GATCGAGCGC GACATCGCGC AAAAATCGAT CACCGTGCTG CGCAACGAGA ACGGCGCGCT GCCGCTGCAG GCCGCGGGCC GGCGCATCTT CATCCTGACG CCGTGGGGCG AGCAGGCCGA GGCGATGCGG CGGCGTTTCG TCGAGCTTGG CCATCCGCTC GTCACGGGCG CGAAGCTGAG CGCGATCACG TGGGCCGAAC AGCAGCAGGC GATCGATGCG GCCGACGTCG TGATCGTCGG CACGCTGTCG ACGGGCGTCA CCCCCGTCGA GCACAACGGG GATCCGAACG CGCGCGTGAG CCCGCCGGCG CCGTCGGCCG TGCGGATGCG GCAGGCCGCG CCCGCGAACG GCGAGGAGGA GGGTTCGGTG ATCTTCGACC ACGTCGAGCG GGCGGACGCG GCGAAGGACA TCGGCGCGCG CCCGAGCGTG CTCGCGGCGA TCGCGGCGCC GAGCGAGGCG CAGCAGATGC GCGACGCGAT GGACTACGCG AAGGCGCGGC GCAAGACCGT GATCCACGTG ACGATGCGCG CGCCGTACGA CGTGATCAGC TACGACGATG TCGCGGACGC GACGCTCGCC ACCTACGCGT ACTACGGCTA CGAAGGCGGC TTGCGCGGCC CGTCGCTGCC CGCGGCCGTC GACGCGATGC TCGGCGTCGC GCGGCCGGTC GGCAGGCTGC CGGTCGCGAT CCACGCGCTG AACGCGGACG GATCGACGGG GCCGCTGCGC TACGCGCGCG GATTCGGGTT GCAGTACTGA
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Protein sequence | MKRRECRGNA RGKDSVKMRK KSLVHLPVAL AVAAALGACS GDDDATLESR ADAIVERMTT RQKVGQKLMM AFRYWCPDGQ PACTAGMTEF PDAARDALRE NGIGGVILFS NNLTGIEQTR RLIDGIRAAP AADSPLGLMI GIDEEGGNVF RLPRVEASAF AGNMALGAAY EATRDDRLAY DMGRVLAAEI AAVGFNVNFA PDVDVNSNPL NPVINVRAFG DDPATIGLLG RRMVQGMKSE RVIGTFKHFP GHGDTDTDSH YGLPVVIKSR ADAYAIDLAP YRQAIEAGEA PDMIMTAHIQ YPSLDDTRVA TRTGEQMIAP ATMSRRIQHD ILRGEFGYQG VTITDALDMK GIAGFFDEDD AVVKVFQADV DIALMPVEFR TAADAGRLAA LVDRVAAAVD SGRIDRAEFD RSVRRIVLTK LRHGIVASDR GRPVDELASI GGPAHRAIER DIAQKSITVL RNENGALPLQ AAGRRIFILT PWGEQAEAMR RRFVELGHPL VTGAKLSAIT WAEQQQAIDA ADVVIVGTLS TGVTPVEHNG DPNARVSPPA PSAVRMRQAA PANGEEEGSV IFDHVERADA AKDIGARPSV LAAIAAPSEA QQMRDAMDYA KARRKTVIHV TMRAPYDVIS YDDVADATLA TYAYYGYEGG LRGPSLPAAV DAMLGVARPV GRLPVAIHAL NADGSTGPLR YARGFGLQY
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