| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1636 |
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| Symbol | |
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| ID | 4901295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1585914 |
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| End bp | 1588325 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640134866 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001065907 |
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| Protein GI | 126453255 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCGGT ACAACGATGA CAGAACGAGC GGACTGCCGC GGCGGCGCGC GGCGGCGTGG
GCGGTGGGCA TCGCATTCGC GGCGGCGGGG CACGCGCGCG CGGGCGAGAC GGCGACGCTC
GCGGACAGCT TCGGCCGCGC GCTGCCGCCC GTGGGGGGCG CGGCGGCGCA CGGCACGCTG
TATCTCGAGC TCGTCGTGAA CGCGCTGTCG ACGGGGCGCA TCGTGCCGGT TCGCTATCGC
GACGGCATCT ACTACGCGCG CGCGGGCGAT CTCGCGCAGG CGTCGGTGCG CACGGGCGCG
CAGCCCGATG CGCTCGTCGA TCTGTCGAGG CTCGACGGCG TGCAGGTCGA ATACGAGAGC
GCCGAGCAGC GGCTGAAGCT CACCGTGCCG CCCGACTGGC TGCCGCGCCA GACGCTCGGT
TCGCCGCGGC TGTACGACCG CACGCCCGCG GCCGTCAGCT TCGGGCTCCT GTTCAATTAC
GACGTGTATG CGAATTCGCC GACGCTCGGC ACGAGCTACA CGTCCGCATG GACCGAGCAG
CGGCTGTTCG ACCGGTGGGG CACCGTGACG AACACGGGCG TCTACCGGCG CGATTACGGT
GGCGGCGCCG GCGGCGTCGG GAGCAACCGC TATCTGCGCT ACGACACGTT CTGGCGCTAT
TCGGACCAGG ACCGGCTGCG CACGTACACC GCGGGCGACG TGATCACGGG CGCGCTGTCG
TGGTCGAGCG CCGTGCGCTT GGGGGGCGTG TCCGTCGAGC GCGATTTCAA GGTGCGGCCC
GACATCGTCA CCTATCCGCT GCCGCAGTTC TCGGGCCAGG CCGCGGTGCC CACCGCGGTC
GATCTGTTCA TCAACGGCAG CAAGACGACG ACGGGGCAGG TGAATCCCGG CCCGTTCACG
ATGAACAACG TGCCGTTCAT CAACGGCGCC GGCGAGGCGA CCGTCGTCAC GACCGACGCG
CTCGGCCGTC AGGTGGCGAC GACGATTCCG TTCTACGTCG CGAACACGCT GCTGCAAAAA
GGGCTCTCCG ATTATTCGCT GTCGGCGGGC GCGATGCGGC GCGACTACGG GATCCGCTCG
TTCTCGTACG GCAAGTTCGC GGCGTCGGGC ACCGCGCGTC ACGGCCTGAC CGATTACCTG
ACGCTCGAGG GCCACGTGGA GGGCGGCGAG CGCTTCGCGC TCGGCGGGCT CGGGTTCGAC
CTCGGCATCG GCATGTTCGG CGTGCTCGGC GTCGCGGCGA CGCAGAGCCG CCTCGCCGGT
GCGTCGGGCC GGCAATACGC GTTCGGCTAC AGCTACGCGT CGCAGCGGTT CAGCGTGTCG
CTGCAGCGCA TCCAGCGCAC GAACGGGTTT CGCGACCTGT CGGTGTACGA CCTGCCGGCG
AACGTCGCGT ACCGGCTCGT GCGCAGCAGC ACGCAGGCGA CGGGCGCGCT CAATCTCGGC
GCGCTCGGCG GCACGCTCGG CGCTGGCTAC TTCGATGTGC GCGGCGCGGA CGGCGCGCGC
ACGCGGATCG CGAACCTGTC GTATACGCGG CCGCTATGGC GGCGCGCGAC GCTCTACGCA
TCGGTCAACA AGACGGTCGG CGAGCACGGC GTGGCCGCGC AACTTCAACT GATCGTGCCG
CTCGGCGAGC CGGGCGTCGT GACGGGCGCG CTCGCGCGCG ACGCGAACAA CAGTTTCAGC
GAGCGCGTGC AGTACAGCCG CAGCGTGCCG AGCGACGGCG GCCTCGGCTG GAATCTCGCG
TACGCGGGCG GCGGCTCGCA TTATCAGCAG GCGGATGCGA CGTGGCGCAA CCGCTACTTC
CAGGCGCAGG GCGGCGTGTA CGGCTACGGC GCGGGGCGCG GCTACGCGCG CTGGGGCGAG
GTGCAGGGCT CGGTCGTCGT GATGGACGGC GCGGTGCTGC CCGCGAACCG TGTCGACGAT
GCGTTCGTGC TGATCGATAC GCAGGGCCGC GGGGGCGTGC CGGTGCGCTA CGAGAATCAG
CTCGTCGGCA AGACCGACGG CGGCGGCCAC CTGCTCGTGC CGTGGGCGCC GTCGTATTAC
GCGGGCAAGT ACGAGATCGA TCCGCTCGAC CTGCCGAGCA ACGTGCGCGT GCCGATCGTC
GAGCGCCGCG TCGCAGTGCG CGACCACGGC GGTGCGCTCG TCACGTTCCC GATCCGCAGG
ATCGTCTGCG CGCAGATCGC GCTCGTCGAC GCGGCGGGCC GGCCGGTCGC CATCGGCTCG
CGCGTGCTGC ACGAGGAGAG CGGCGAGACC GCGCTCGTCG GCTGGCAGGG CGAGACCTAT
CTCGAAGGCT TGTCCGCGCT CAACCACCTG CGCGTGCGGA CGCCCGACGG CCGCACCTGC
CGCGCGACGT TCGCAGCCGA CGTCGACGCG GCGCAGATGA GCCGCGTCGG CCCGCTCGCG
TGCGGCGAAT AA
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| Protein sequence | MKRYNDDRTS GLPRRRAAAW AVGIAFAAAG HARAGETATL ADSFGRALPP VGGAAAHGTL
YLELVVNALS TGRIVPVRYR DGIYYARAGD LAQASVRTGA QPDALVDLSR LDGVQVEYES
AEQRLKLTVP PDWLPRQTLG SPRLYDRTPA AVSFGLLFNY DVYANSPTLG TSYTSAWTEQ
RLFDRWGTVT NTGVYRRDYG GGAGGVGSNR YLRYDTFWRY SDQDRLRTYT AGDVITGALS
WSSAVRLGGV SVERDFKVRP DIVTYPLPQF SGQAAVPTAV DLFINGSKTT TGQVNPGPFT
MNNVPFINGA GEATVVTTDA LGRQVATTIP FYVANTLLQK GLSDYSLSAG AMRRDYGIRS
FSYGKFAASG TARHGLTDYL TLEGHVEGGE RFALGGLGFD LGIGMFGVLG VAATQSRLAG
ASGRQYAFGY SYASQRFSVS LQRIQRTNGF RDLSVYDLPA NVAYRLVRSS TQATGALNLG
ALGGTLGAGY FDVRGADGAR TRIANLSYTR PLWRRATLYA SVNKTVGEHG VAAQLQLIVP
LGEPGVVTGA LARDANNSFS ERVQYSRSVP SDGGLGWNLA YAGGGSHYQQ ADATWRNRYF
QAQGGVYGYG AGRGYARWGE VQGSVVVMDG AVLPANRVDD AFVLIDTQGR GGVPVRYENQ
LVGKTDGGGH LLVPWAPSYY AGKYEIDPLD LPSNVRVPIV ERRVAVRDHG GALVTFPIRR
IVCAQIALVD AAGRPVAIGS RVLHEESGET ALVGWQGETY LEGLSALNHL RVRTPDGRTC
RATFAADVDA AQMSRVGPLA CGE
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