| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1627 |
|---|
| Symbol | |
|---|
| ID | 4899298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 1581543 |
|---|
| End bp | 1582436 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640134857 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001065898 |
|---|
| Protein GI | 126453156 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.682132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCA AGCATCTACG TTATTTTCTG GCCATCGCCG ATACCGGCAG CCTCACTCAT
GCGGCGATTC GTCTCGGTGT CGCGCAGCCC GCGCTCAGCC ACGCGCTGAC GAAGATGGAG
CGAGAGCTCG GCGTGAAGCT GTTCGACCGC TCGAGGCGCG GCGCGACGCT CACGACGGCG
GGCGAGGCGA TCGTCGACGA CATTCGCCTG AGCCTCGCGC GAATGGACGC CGCCGCGCGC
CGCGCGAGCG AGATCGGCGC GCAGCGGGCC GGGCGGCTGA GCATCGGCTT CGTATCGGCC
GCGCTGTTCG ATACGTTGCC CTCCGCCGTG TGCGCGCTGC GCGCGGCATC GCCGCGCGTC
GATCTCGTGA TGCGCGAGAT GAGCAACGCG GAGCAGGTGG TCGCGCTCGA GCGCGGCGAG
ATCGATATCG GGATTCTGCA TACGCCGGTG GCGATCGGCG GCCCGGTTCA CGAGAAGCTG
ATTCGGCGCG ATCCGCTGAT CGCCGTGATT CCGAAGTCGT TTCCTCGCCA GCCGGACGGC
TCGATCACGC TGAGGGAACT GTCGCGCGCG GGGCTCATCT GGTTTCCGCA CGAGCAGCTG
CCGTCGATCC GCGCGGCGAT CCTCAGCGCG TTTCGGCTGG CGGGCCATCC GATCGAGGTC
GTCCAGGATG CGAATCGCAC GCTGACCGTG ATCGCCTGCG TCGCGGCGGG TTGCGGCGTA
TCGCTGCTGC CGTCGTCGAT CCGCACGCTG ACGTTCGAAG GCGTCGATTT CAGTCCGGTC
TCCGACGGGC ATGCGTTGCC GGAATTTCCG TTGACGGCGA TCTGGCCGAA GCGGTCGCGC
CGAACGCTCG CCGATCGGTT CGCGGAGTTG TTGCCCCGGT TTCAGCCGAA CTGA
|
|---|
| Protein sequence | MESKHLRYFL AIADTGSLTH AAIRLGVAQP ALSHALTKME RELGVKLFDR SRRGATLTTA
GEAIVDDIRL SLARMDAAAR RASEIGAQRA GRLSIGFVSA ALFDTLPSAV CALRAASPRV
DLVMREMSNA EQVVALERGE IDIGILHTPV AIGGPVHEKL IRRDPLIAVI PKSFPRQPDG
SITLRELSRA GLIWFPHEQL PSIRAAILSA FRLAGHPIEV VQDANRTLTV IACVAAGCGV
SLLPSSIRTL TFEGVDFSPV SDGHALPEFP LTAIWPKRSR RTLADRFAEL LPRFQPN
|
|---|
| |