Gene BURPS1106A_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1185 
Symbol 
ID4901000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand+ 
Start bp1164979 
End bp1165611 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID640134415 
ProductTetR family transcriptional regulator 
Protein accessionYP_001065464 
Protein GI126451522 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.193625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CAAAAATCAA AAGAGACCCA GAGGGAACCC GGCGCCGGAT CCTGCTCGCG 
GCGGCCGAAG AGTTCGCGAC AGGGGGGCTG TTCGGTGCGC GAGTCGACCA GATCGCGCGC 
CGCGCCGAGA CCAACGAGCG GATGCTCTAT TACTACTTCG GCAGCAAGGA GCAATTGTTT 
ACCGCGGTGC TCGAATACGC GTTTTCCGCG CTGATGGAGG CCGAGCGGGC GATCGATCTC 
GAAGGCGTCG CGCCCGTCGA GGCGATCACG CGGCTCGCGC ATTTCGTGTG GGACTACTAT 
CGCGATCATC CCGATTTGCT GCGCCTGCTC AACAACGAGA ATCTGCACGA GGCGCGCTAT 
TTGCAGAAAT CGACGCGCAT CCGCGAGATG ATCTCGCCGA TCGTCAAGAC GCTCGACGGC 
GTGCTCGAGC GCGGCCAGAA GGCGGGGCTC TTTCGCACGG ACATCGATTC GCTGCGGTTC 
TACGTGACGC TGTCGGGGCT CGGCTACTAC ATGGTGTCGA ACCGCTTCAC GCTCGCCGCG 
ATCTTCGGCC GCGATTTCAG CGCGCAGCAC GAGCGCGCCG AGATGGTCAA GATGAACACC 
GAGTTGCTGC TCGCGTTTCT GTTGAGGCGC TGA
 
Protein sequence
MNQPKIKRDP EGTRRRILLA AAEEFATGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF 
TAVLEYAFSA LMEAERAIDL EGVAPVEAIT RLAHFVWDYY RDHPDLLRLL NNENLHEARY 
LQKSTRIREM ISPIVKTLDG VLERGQKAGL FRTDIDSLRF YVTLSGLGYY MVSNRFTLAA 
IFGRDFSAQH ERAEMVKMNT ELLLAFLLRR