| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1163 |
|---|
| Symbol | |
|---|
| ID | 4900968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1142932 |
|---|
| End bp | 1144113 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640134393 |
|---|
| Product | aminotransferase, class I/II |
|---|
| Protein accession | YP_001065442 |
|---|
| Protein GI | 126455457 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.488636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA GCGATCTCAA GCCGCCCCGC TGGGCCCTGT CCGAACGCGC ACGCAAGCTC
ACGAGCTCGG CGATCCGCGA AATCCTGAAA GTGACCGAGC GCCCCGAGGT GATCTCGTTC
GCGGGCGGCC TGCCCTCGCC CGCGACGTTC CCCGCCGAGC GCATGCGCGA GGCCGCGGAG
CGCGTGCTGC GCGATTCGCC CGCCGCCGCG CTGCAATACA GCGCGACGGA AGGCTTCCTG
CCGCTGCGCG AGTGGATTGC CGAGCGCTAC CGCGTGCGCA CGACGCAGGT GCTCGTCACG
ACGGGCTCGC AGCAGGCGCT CGATCTGCTC GGCAAGGTGC TGATCGATCC GGCGAGCCGC
GTGCTCGTGG AGACGCCGAC CTACCTCGGC GCGCTGCAGT CGTTCTCGCT GTACGAGCCG
ATCTACGCGC AGGTGCCGAC CGACGACGCG GGCCTGCTGC CCGAAGCGCT CACGCCCGAG
CTGACGAAGG ACGCGCGATT GTTGTATGCG CAACCGAACT TCCAGAACCC GACGGGCCGC
CGCCTGAGCG TCGAGCGCCG CCGCGCGCTC GCCGCCTTCG CGCGGACGAG CCCGTTCCCG
GTGCTCGAGG ACGATCCGTA CGGCGCGCTG AACTACGCGG GCGAGCCGCT GCCGACGATG
CTGTCGATGG CGCCCGATCA CATCGTCCAT CTCGGCACGT TCTCGAAGGT GCTCGCACCC
GGCCTGCGGA TCGGCTATAT CATTGCGCCC GAGGAGCTGC ACTTCAAGCT CGTGCAGGCC
AAGCAGGCGA CCGACCTGCA CACGCCGTCG CTCACGCAGC GCATCGCCCA CGAAGTCATC
CAGGACGGCT TCCTCGATGC GCACATCCCG ACGATCCGCA AGCTCTACGG CGCGCAGTGC
GAAGCGATGC TCGCGTCGCT CGCGCGGCAC ATGCCGCAAG GCGTGAGCTG GAACCGCCCG
GAAGGCGGGA TGTTCATCTG GGTGACGCTG CCCGCGCAGA TCGACAGCAT GCAGCTCCTC
GAGACGGCGG TCGCGAACAA CGTCGCGTTC GTGCCGGGCG CGCCGTTCTT CGCGAACGAC
GCGCAGAAGA ACACGCTGCG GCTGTCGTTC GTCACCGTGC CGCCGGAGAA GATCGAGGAA
GGCGTCGCGC GGCTCGGCAA GCTGTTGCGC GAGCGCCTGT GA
|
|---|
| Protein sequence | MNPSDLKPPR WALSERARKL TSSAIREILK VTERPEVISF AGGLPSPATF PAERMREAAE
RVLRDSPAAA LQYSATEGFL PLREWIAERY RVRTTQVLVT TGSQQALDLL GKVLIDPASR
VLVETPTYLG ALQSFSLYEP IYAQVPTDDA GLLPEALTPE LTKDARLLYA QPNFQNPTGR
RLSVERRRAL AAFARTSPFP VLEDDPYGAL NYAGEPLPTM LSMAPDHIVH LGTFSKVLAP
GLRIGYIIAP EELHFKLVQA KQATDLHTPS LTQRIAHEVI QDGFLDAHIP TIRKLYGAQC
EAMLASLARH MPQGVSWNRP EGGMFIWVTL PAQIDSMQLL ETAVANNVAF VPGAPFFAND
AQKNTLRLSF VTVPPEKIEE GVARLGKLLR ERL
|
|---|
| |