| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1160 |
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| Symbol | |
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| ID | 4903107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1138925 |
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| End bp | 1141243 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640134390 |
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| Product | diguanylate cyclase/cyclic diguanylate phosphodiesterase |
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| Protein accession | YP_001065439 |
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| Protein GI | 126452559 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGCGA CACGCAAGTC GCGCCGCCGC CGCGCGCTGT TCGCGATTCC GCTCCTCGGC
ACGCTGGCGC TCGCGCTGCT GTGGGTGGCC ATCATCGCGC GCCTGTCCGT CGAGAAGGAC
AGCGCGTTCC GCGATGCGGG CGCGTCGGCC GCGATCCTGT CGACGGCGCT CGAGCAGCAC
ACGGTCAAGG CGATCCATCA GGTCGACCAG ATCACCCGCT TCGTCAAATA CGAATTCGAG
AAGTCGCCCA CCCGCTTCAA CCTTGCGAGC ACGGTGGAGA AAGGCGTGGT GCCGAGCGAC
ACGCTGATCC AAGTGTCCAT CCTCGATGCG CGCGGCCGGC TCGTCGCGAA CACGGCCGAG
GCGCATCCGA AGCCGATCGA TCTGTCCGAC CGCGAGCACT TCAAGGTGCA CATGCAGCGC
AACGACGACG ATCTCTACAT CAGCAAGCCG GTGTTCGGCC GCGTGTCGCG CCACTGGACG
CTGCAGATGA CGCGGCGCCT GAACCATCCG GACGGCTCGT TCGCCGGCGT GGTCGTCGTG
TCCGAGGATC CGGCCTACTT CACGAACGAC TTCTACAACA ACGCGACGCT CGGCAAGGAC
GGCGTGATCG CGGTGATCTC GGATACGGGC GCCGTGCTCG CGCGCAGCAC GGGCTCCACG
CAGAAGACGC CCGGCACGTT CTCGGCATCG GGCGTCTACC CGGTGTCGGA GCGCGCCTCG
GGCACCTATG TCGATCCGAT CGACGGCATC GTGCGCATCG TGTCGTATCG CCATCTCGAC
GGCTATCCGC TCGGCGTGAT GGTGGGCCTG TCGCAGGCTG AAGAATTCGC CGACTACCAC
CACACGCGCA ATGTCTATCT GCTGATGACG GGCTTCATCA CGCTCGCGAT GCTCGCGTTC
TTCGGCGTCG CGACGGGCCT GATCGGCAAG CTGCTCGGCC GCGAGCGCGA AATGACGCAG
CTCGCCGAGT TCGATCTGCT GACGGGGCTT GCGAACCGCT ATGCGACGCT GCGCAGCCTG
CGCAACGACG TCGCGCTGCC GTCGAATCTG TCGCGCCTCG CGATCCTGTT CATCGATCTC
GACAATTTCA AGACCGTCAA CGACACGCTC GGCCACAACG CGGGCGACAT CGTGCTGCAG
ATGACGGCCG CGCGCCTGTC CGATGCGGTG GCGAACGAAG GCGCGCTCGC GCGCATCGGC
GGCGACGAGT TCGTCGTCGT CGTGAAGGGC GAGAACGTCG AGCGGCGCGC CGAGCGGCTC
GCGGAGGCGA TCGTGCGAAT GTTCGCCGAG CCGTTCGACG TGCGCGGCAG CTCGTTCGTG
CTGCACGCGA GCATCGGCAT CGCGCTGCAT TCGGTGGAGA ACGAAAGCGA GATCGACTTG
CTGAAGAAGG CCGATCTCGC GATGTACAGC GCCAAGGACG CCGGCAAGAA CTGCTACCAG
TTCTATGCGC CGCACTTGTC GCACCGCGCC GATCACCTGA TGCGCTGGGA GCAGCAGTTG
CGCGTCGCGC TGTCGGACGG GCAACTGTTC CTCGCCTACC AGCCGAAGAT CGATCTCACG
TACCGCTGCA TCACCGGCTT CGAGGCGCTC GTGCGCTGGG ACCATCCGGA GCACGGCGTG
ATCTCCGCGA ACGAATTCAT TTCGATCGCC GAATCGACCG GGCTCATCGT GCCGATCGGC
GACTTCGTGA TCCGCACCGC GTGCGAGCAG CTCGCGCGCT GGCGCAACGA GGGCCACGAC
AAGCTCACGC TCGCCGTCAA TATCTCGCCC GTGCAGTTCT GGCGCGGCGA CCTGATCGAC
ACGATCTCGC GCGCGCTCGC CGAGACCGGA ATCGAGGCGC GCCGCCTCGA GCTCGAGATC
ACCGAGACCG CGATGATGGA ATACCCTGAG CTCGTATCGG AGAAGATCGT CGCGCTGAAA
AGGCTCGGGA TCCGCGTCGC GCTCGACGAT TTCGGCACCG GCTATTCGTC GCTGTCCTAC
CTGCACCGCT TCGCGGTCGA CACGCTGAAG GTCGACCGCT CGTTCATCCA GGCGATTCCG
GCCGACCGCA GCGTGTGCGT GATGGTGTCG TCGATCGTGC ACCTCGCGCG CTCGCTCGGG
CTCACGGTCG TCGTCGAGGG GACGGAGACG GAGGAGCAGA TCGCGTGGCT TGCCGCGCTC
GGGCGCATCG AGGCGCAAGG CTTCCTGTTC TCGCGGCCGG TGCCCTCCGA CGGCATTGCG
GCCCTGCTCG CGCGCTTCGG CGTCTGCGGC GGCGACAGCG CGCGCGCGGC GGGCCGCGAC
ATCGCGAACG CCGCTAAACA GTCGTTCGGC AGCGACTAA
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| Protein sequence | MRATRKSRRR RALFAIPLLG TLALALLWVA IIARLSVEKD SAFRDAGASA AILSTALEQH
TVKAIHQVDQ ITRFVKYEFE KSPTRFNLAS TVEKGVVPSD TLIQVSILDA RGRLVANTAE
AHPKPIDLSD REHFKVHMQR NDDDLYISKP VFGRVSRHWT LQMTRRLNHP DGSFAGVVVV
SEDPAYFTND FYNNATLGKD GVIAVISDTG AVLARSTGST QKTPGTFSAS GVYPVSERAS
GTYVDPIDGI VRIVSYRHLD GYPLGVMVGL SQAEEFADYH HTRNVYLLMT GFITLAMLAF
FGVATGLIGK LLGREREMTQ LAEFDLLTGL ANRYATLRSL RNDVALPSNL SRLAILFIDL
DNFKTVNDTL GHNAGDIVLQ MTAARLSDAV ANEGALARIG GDEFVVVVKG ENVERRAERL
AEAIVRMFAE PFDVRGSSFV LHASIGIALH SVENESEIDL LKKADLAMYS AKDAGKNCYQ
FYAPHLSHRA DHLMRWEQQL RVALSDGQLF LAYQPKIDLT YRCITGFEAL VRWDHPEHGV
ISANEFISIA ESTGLIVPIG DFVIRTACEQ LARWRNEGHD KLTLAVNISP VQFWRGDLID
TISRALAETG IEARRLELEI TETAMMEYPE LVSEKIVALK RLGIRVALDD FGTGYSSLSY
LHRFAVDTLK VDRSFIQAIP ADRSVCVMVS SIVHLARSLG LTVVVEGTET EEQIAWLAAL
GRIEAQGFLF SRPVPSDGIA ALLARFGVCG GDSARAAGRD IANAAKQSFG SD
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