| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1157 |
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| Symbol | aphA |
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| ID | 4902254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1136172 |
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| End bp | 1137197 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640134387 |
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| Product | acetylpolyamine aminohydrolase |
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| Protein accession | YP_001065436 |
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| Protein GI | 126454260 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.470234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACGT ACTTCCACCC CGATCAATCA CTGCATCATC CGCGCACGTA CTTCTCGCGC
GGCCGGATGC GCATGCCGCA GGAGGTGCCC GAGCGCGCGG CGCGGCTCGT CGCGGCGGCG
TTCGCGATGG GTTTTCCGGT GCGCGAGCCG GACGATTTCG GCATCGCGCC GATCGCGGCC
GTGCACGACA CGCACTACCT GCGCTTTCTC GAGACCGTGC ATCGCGAATG GAAGGCGATG
CCGGAGGACT GGGGCGACGA AGCGATGTCG AATATTTTCG TGCGCGAGCC GAACGCGTTG
CGCGGCGTGC TCGCACAGGC CGCCCGTCAC CTCGCGGACG GCAGTTGCCC GGTCGGCGAG
CACACGTGGC GCGCGGCGTA CTGGTCCGCG CAGAGCGCGC TCGCGGCGGC GGCGGCGGTG
CGCGACGGCG CGCCCGCAGC GTATGCGCTG TGCCGGCCGC CGGGCCATCA TGCGCGCGTC
GACGCCGCGG GCGGCTTCTG TTATCTGAAC AACGCGGCGA TCGCCGCGCA GGCGCTGCGC
GCGCGCCATG CGCGCGTCGC CGTCCTCGAC ACCGACATGC ATCACGGGCA AGGCATACAG
GAAATCTTCT ACGCGCGGCG CGACGTGCTG TACGTATCGA TTCACGGCGA TCCGACGAAC
TTCTACCCGG CCGTCGCGGG CTTCGACGAC GAGCGCGGCG CGGGCGAAGG CCTCGGCTAC
AACGTGAATC TGCCGATGCC GCACGGCTCG AGCGAAGCGG CGTTCTTCGA GCGCGTCGAC
GATGCGCTGC GCGAGTTGCG GCGCTTCGCG CCCGATGCGC TCGTGCTGTC GCTTGGGTTC
GACATCTATC GCGACGATCC GCAATCGCAG GTGGCGGTGA CGACGGACGG TTTCGGTCGA
TTGGGACACC TGATCGGCGC GCTGCGGCTG CCGACCGTCA TCGTGCAGGA AGGCGGCTAT
CACATCGAGA GCCTCGAGGC GAATGCGCGG TCGTTCTTCG GCGGATTCGG CGCGCTGCGC
GGTTGA
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| Protein sequence | MLTYFHPDQS LHHPRTYFSR GRMRMPQEVP ERAARLVAAA FAMGFPVREP DDFGIAPIAA
VHDTHYLRFL ETVHREWKAM PEDWGDEAMS NIFVREPNAL RGVLAQAARH LADGSCPVGE
HTWRAAYWSA QSALAAAAAV RDGAPAAYAL CRPPGHHARV DAAGGFCYLN NAAIAAQALR
ARHARVAVLD TDMHHGQGIQ EIFYARRDVL YVSIHGDPTN FYPAVAGFDD ERGAGEGLGY
NVNLPMPHGS SEAAFFERVD DALRELRRFA PDALVLSLGF DIYRDDPQSQ VAVTTDGFGR
LGHLIGALRL PTVIVQEGGY HIESLEANAR SFFGGFGALR G
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