Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1113 |
Symbol | |
ID | 4901282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1093530 |
End bp | 1094903 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640134343 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001065393 |
Protein GI | 126452483 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.239242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCG ACTCCGGACT GCCGTTCCCG CAACGCTACT GGGCGATCGT CTGCGTCGCG CTGGGCATCA CGCTCGCCGT GCTCGACGGC GCGATCGCGA ACGTCGCGCT GCCGACGATC GCCCGCGATC TGCGCGCCTC CGACGCCGCG TCGATCTGGA TCGTCAACGC GTACCAACTC GCCGTCACGA TCTCGCTGCT GCCGCTCGCC TCGCTCGGGG ACCGCATCGG CTACCGGCGC GTCTACATCG CGGGGCTCAT GCTCTTCACG GCGGCGTCGC TCGGCTGCGC GCTGTCGGGC ACGCTGCCCG CGCTCGCGAC GCTGCGCGTG ATCCAGGGCT TCGGCGCGGC CGGCATCATG AGCGTGAATA CCGCGCTCGT GCGGATGATC TATCCGTCTT CGCAACTCGG GCGCGGCGTC GCGATCAACG CAATGGTCGT CGCGCTGTCG TCGGCGGTCG GGCCGACCGT CGCGTCCGCG GTGCTCGCCG TCGCGCCGTG GCCGTGGCTC TTCGCGATCA ACGTGCCGAT CGGCGTCGCC GCCGTGTGCG GCAGCCTGCG CGCGCTGCCG GCGAATCCGG GCCGCAGCGC GCCGTACGAT TTCATCGGCG CCGTGATGAA CGCCTGCGTG TTCGGGCTGT TGATCGTGTC CGTCGACGGG CTCGGCCACG GCGGGAATCG CGCGAGCGTC GCGCTCACCG CGCTCGTGGC CGCCGTGATC GGCTACTTCT TCGTCAAGCG CCAGTTGACG CAGCCCGCGC CGCTGTTGCC CGTCGACCTG ATGCGCGTTC CGATCTTCGC GCTGTCGATC GGCACATCGG TCGCGTCGTT CACATCGCAG ATGCTCGCGT TCGTCGCGCT GCCGTTCTGG CTACAGAACA CGCTCGGCTT CTCGCAGGTC CAGACGGGGC TCTACATGAC GCCGTGGCCG CTCGTGATCG TCGTCGCGGC GCCGCTCGCG GGCGTGCTGT CCGACCGCTA TTCGGCGGGC GCGCTGGGCG GCATCGGCCT CGCCCTGTTC GCATCCGGCC TGTTCGCGCT CGCGACGATC GGTGCGCACC CGACGCCCGT CGACATCGTG TGGCGGATGG CGCTGTGCGG CGCGGGCTTC GGGCTCTTCC AGTCGCCGAA CAACCGCGCG ATCCTGTCGT CCGCGCCGCG CGAGCGCGCG GGCGGCGCAA GCGGGATGCT CGGCACCGCC CGGCTCACCG GACAAACGCT CGGCGCCGCG CTCGTCGCGC TGATCTTCGG CATCGCGCCG CAGCACGGGC CGACGATCGC GCTCTACGCG GCGAGCTCGT TCGCCGCCGT CGCGGCGGCC GTGAGCCTGC TGAGAATCCG CGCGCGGCGC GATACGACCG CCGCAGCGGG TTGA
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Protein sequence | MNADSGLPFP QRYWAIVCVA LGITLAVLDG AIANVALPTI ARDLRASDAA SIWIVNAYQL AVTISLLPLA SLGDRIGYRR VYIAGLMLFT AASLGCALSG TLPALATLRV IQGFGAAGIM SVNTALVRMI YPSSQLGRGV AINAMVVALS SAVGPTVASA VLAVAPWPWL FAINVPIGVA AVCGSLRALP ANPGRSAPYD FIGAVMNACV FGLLIVSVDG LGHGGNRASV ALTALVAAVI GYFFVKRQLT QPAPLLPVDL MRVPIFALSI GTSVASFTSQ MLAFVALPFW LQNTLGFSQV QTGLYMTPWP LVIVVAAPLA GVLSDRYSAG ALGGIGLALF ASGLFALATI GAHPTPVDIV WRMALCGAGF GLFQSPNNRA ILSSAPRERA GGASGMLGTA RLTGQTLGAA LVALIFGIAP QHGPTIALYA ASSFAAVAAA VSLLRIRARR DTTAAAG
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