Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1069 |
Symbol | |
ID | 4903274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1047336 |
End bp | 1049636 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640134299 |
Product | fimbrial usher protein |
Protein accession | YP_001065349 |
Protein GI | 126453579 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCG AGGCGGCCGC GCCGCCCGCG CGGTCCGCAT TGCCCGGGCC GACGACGAGC CTGCCGGTGC CGAGCGCCGA CGCGACCGTC CCCGCGAGCG ACCTGTATCT CGGCGTCTCG CTGAACGGCC AGCCGACGCG CCTGATCGTG CACTTCGTCG TCGCCGACGG GCGCTTCTAC GCGAGCCAGG ACGATCTGAA CGACATCGGC GTCGCGACGT CACGGCTGCG ACAGCCGGCG AACGCGCTCA TCGCGCTCGA TGCGCTCGAC GGCCTGCGCT ACCGCTACGA CGCCGCGCGC CAGACGATCG ATCTCGACGC GCCCGATTCG CTGCGCATCC CGCACACGTT CGACACACGC GCGCTCGCGC CGACGGTCCC CGCGAGCGCG GGCCGCGGCC TCGTGCTGAA CTACGACCTC TATGCGCAGA CGGCCGATCG CGCGAGCGCG GCGCTCTGGC ACGAGGCGCG CTACTTCGAT CCGGCCGGCG TCTTCAGCAG CACGGGCGTC GCGTATCTTC AGCACGGCGG CCAGCGCTAC ACGCGCTACG ACACCTCGTG GAGCATGTCC GATCCGAAAT CGCTGACGAC GACGCAGTTC GGCGACACGA TCTCGTCGTC GCTCGCCTGG ACGCGCTCGC TGCGCGTCGC CGGCCTGCAA TGGCGCAGCA ACTTCGCGCT GCGTCCGGAC CTCGTGACGT TCCCGGTGCC GGCGCTCGCG GGCACGGCCG TCGTGCCGTC GACCGTCGAT CTGTACGTGA ACGGCGTGCG CCAGTTCAGC GGCGACGTGC CGAGCGGCCC GTTCGTCATC AACAGCGTGC CGGGCATCAC GGGCGCGGGC AACGCGACCG TGGTCACGCG CGACGCGCTC GGGCGCACGA TCGCGACGTC GCTGCCGCTC TACATCGACA CGCGGATGCT CGCGCCCGGC CTCGCGAGCT ATTCGGTCGA GGCGGGTTTC CTGCGGCGCG CGTGGGGGCT GCGCTCGTTC GACTACGCGC CCCGCCCGGC CGTGAGCGCG ACCGCGCGCT ACGGCGTGAG CGAGCGCCTG ACCGTCGAGG CGCACGCGGA GGCGACGCCC GGCCTCTACA ACGCGGGCGC GGGCGCGCTC GTGCGGCTCG GCGGCGCGGG GGTCGCGAGC GCGTCGGCCG CGCAAAGCGC CGGGCGCCTC GCGGGCACGC AGGCCGGCCT CGGCTACCAG CTCGTGCTGC CGCGCTTTTC GATCGACGCG CAAACGCTGC GCGCGTTCGG CCAATACGGC GACCTCGCCG CGCGCGACGG CACGCCGGTG GCGAGCGCGA CCGATCGCGT CACGCTGTCG CTGCCGTTCA TCCGCTCGCA GACGTTCGCG ATCAGCTACA TCGGCCTCAG GTATCCGGGC CTGCAAACCG CGCGGATCGG CTCCGTGTCG TACTCGGTCA ACGTCGGCAA CCTTGCGTCG ATCAACGTCA GCGCGTTCCA GGACTTCCAC CAGCACGACT CGCGCGGCGT GTTCGTGAGC CTGAACGTCG CGCTCGGCAA CCGGACGTCG GTCAACGCGA ACGTCGGCCG GCAGAACGGC AAGACGGTCT ACAACGTGAA CGCGATGCGC GCGCCCGACT ACGGCGGCGG CTTCGGCTGG AGCGCGCAGA CGGGCGACGC GGGCGGCGTG CGCTACGGCC AGGCGCAGGC GCGATATCTC GGCCGCTCGG GCGAGGTGGC GGCGCTCGCG CAGACGATCG CCGGACATCA GAACGCGGCG CTCGACGTGG CGGGCGCCGT CGTGCTGATG GACGGCCGCG CGCTGCTCAC GCGGCGCATC GACGACGGCT TCGCGCTCGT GTCGACCGAC GCTTCGCCGG GCGTGCCGGT GCTGCACGAG AATCGCCTGA TCGGCACGAC CGACCGCAAC GGCTACCTGC TGATTCCGGA TCTGAACGCG TACCAGAACA ACCGGATCGG CATCGACACG TTGAAGCTGC CGCTCGACGC GCGCGTATCC GACACGATTC GCAACGTCGT TCCGCAGTCG CGCTCGGGCG TGCTCGCGCA TTTCGCGATC GCGCGCGAAC AGTCGGCGTC GATCGTCCTC GAGGATGCGT CCGGCGCGCC GCTGCCGGCC GGGCTGTCGG TCTCGCATCG CGAGAGCGGC GCGAGCACGA TCGTCGGCTA CGACGGGCTC ACGTTCGTCA CGGGCCTCGC GGCCGCCAAT CACCTGGAGA TCACGGGCCA CGGCAAGCGC TGCGCGGTCG CGTTCGACTA TGTGCGCCCG GCCGACGGCA CGCCGCCGAC GATCGGGCCG CTCGTCTGCG ACCTGAAGTG A
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Protein sequence | MLAEAAAPPA RSALPGPTTS LPVPSADATV PASDLYLGVS LNGQPTRLIV HFVVADGRFY ASQDDLNDIG VATSRLRQPA NALIALDALD GLRYRYDAAR QTIDLDAPDS LRIPHTFDTR ALAPTVPASA GRGLVLNYDL YAQTADRASA ALWHEARYFD PAGVFSSTGV AYLQHGGQRY TRYDTSWSMS DPKSLTTTQF GDTISSSLAW TRSLRVAGLQ WRSNFALRPD LVTFPVPALA GTAVVPSTVD LYVNGVRQFS GDVPSGPFVI NSVPGITGAG NATVVTRDAL GRTIATSLPL YIDTRMLAPG LASYSVEAGF LRRAWGLRSF DYAPRPAVSA TARYGVSERL TVEAHAEATP GLYNAGAGAL VRLGGAGVAS ASAAQSAGRL AGTQAGLGYQ LVLPRFSIDA QTLRAFGQYG DLAARDGTPV ASATDRVTLS LPFIRSQTFA ISYIGLRYPG LQTARIGSVS YSVNVGNLAS INVSAFQDFH QHDSRGVFVS LNVALGNRTS VNANVGRQNG KTVYNVNAMR APDYGGGFGW SAQTGDAGGV RYGQAQARYL GRSGEVAALA QTIAGHQNAA LDVAGAVVLM DGRALLTRRI DDGFALVSTD ASPGVPVLHE NRLIGTTDRN GYLLIPDLNA YQNNRIGIDT LKLPLDARVS DTIRNVVPQS RSGVLAHFAI AREQSASIVL EDASGAPLPA GLSVSHRESG ASTIVGYDGL TFVTGLAAAN HLEITGHGKR CAVAFDYVRP ADGTPPTIGP LVCDLK
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