Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1002 |
Symbol | |
ID | 4899238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 981086 |
End bp | 982048 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640134232 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001065283 |
Protein GI | 126453248 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGAGG TCAATCGTTT CTCCGAGATG GCCGTCTTCG TTCAGGTGAT CGAGTCGTGC GGATTCTCGG CGGCGGGACG ACGGCTCGAC ATGACGCCGT CGGCGATCAG CAAGTTCGTT CAACGGCTCG AGACGCGGCT CGGCGTGCGC CTGTTGAATC GCACGACGCG CAAGCTGCAG CTCACGCCCG AAGGCGCCGC GTTTTACGAG CGCTGCGTGC GCATTCTCGA GGACATCGCC GACGCCGAGC GCGAAGCGAC GCACGGCGCG ACTCCGCAGG GGCGCGTGCG GATCAATTCG CACGTGCCGT TCGGCAAGCA TCATCTGATG CCGCTCTTGC CGGAGTTCCA GCGCCGCTAT CCGGACATCA CGCTCGACAT CGTGCTGTCG GATTCGCTCG TCGATCCGCT CGACGAGCGC AGCGACATCG CGATCCGCTC GGGCGCGCTC GACGATTCGC GGCTCGTGAT GCGCAAACTC GGCGGCAGCC GGATGGTCGT CGTCGGCGCG CCGGCGTATC TCGAGCGCAA CGGCGTGCCG GCAACGCCCG ACGACCTCGA CCGCCACAAC TGCATCGGCC TGAGCGGCAA CGCGAAGGCT TGGCCGTTCG TCGCGGAGGA AGGCCAGCGT CTGCTGCCGT CGGCCGGCAA CCTGCTGCTC GGCGACAACG AGAGCATCCG CGAAGCAGCC GTCTCCGGGC TCGGGCTCGC GCGGCTCGCG CGCTTTCACG TCGACGCGGA CCTCGACGCG GGGCGCCTCG TGCCGGTGCT CGAAGCGTTC AATCCGGGCG ACGAAGAAGA GATCAACGCG GTGTTCGTCG GGCCGAGCGA GCATCTGCCG ATGCGCGTGC ACGCGCTGCT CGATTTCCTG AAGGAGCGCA TACGCATCGG CCCGCGCGCC GCCGGCGAAC GCGGCGAGGC ATCGGCGCTC GGCGCGCGCG CGTTCGTCAC GCGGCTGCGC TGA
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Protein sequence | MREVNRFSEM AVFVQVIESC GFSAAGRRLD MTPSAISKFV QRLETRLGVR LLNRTTRKLQ LTPEGAAFYE RCVRILEDIA DAEREATHGA TPQGRVRINS HVPFGKHHLM PLLPEFQRRY PDITLDIVLS DSLVDPLDER SDIAIRSGAL DDSRLVMRKL GGSRMVVVGA PAYLERNGVP ATPDDLDRHN CIGLSGNAKA WPFVAEEGQR LLPSAGNLLL GDNESIREAA VSGLGLARLA RFHVDADLDA GRLVPVLEAF NPGDEEEINA VFVGPSEHLP MRVHALLDFL KERIRIGPRA AGERGEASAL GARAFVTRLR
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