Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0975 |
Symbol | |
ID | 4902304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 958255 |
End bp | 959607 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640134205 |
Product | small conductance mechanosensitive ion channel (MscS) family protein |
Protein accession | YP_001065256 |
Protein GI | 126452978 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACGA ACCACCTCAC ACGGCGGCTC GCGGCCGTCG CGCACGACTT CGGCCAGCCG GCGATGATCT GGCAGGCGGT CGCGTTCTTC GGCTCGCTCG CGCTCGCGTG GCTGCTCGCG CGCCATCTGC GCGGGCGCAT CGACGCGCGC CGTCGCGCGG CCGGGCGCAC GCCCGGCCCG GGCGCGCTGA GCCTGAACCG CGCGCTGTTC CCGCTCATCG GCGGCGTGTT CATGTGGCTC GCGGAGACGA CGTTCGACGA GCTGATGCCG ACGTCGCTCC TGCAGCTCGC GCTCGTGCCG CTCTTCGGCA TCGGGCTCAT CTACATCCTG TTCTTCGTCG CGCGCCGCGT GTTCGCGCGC GACGGCCACA CGCACGCGTG GCTGTCGATC GTCGAGAAGC TCGTGTCGAT CGTCGTGTGG ATCGCGATGG CGCTCACGGT ACTCGGCATC CAGCGCGACG TGCTCGGCTG GCTCGACAGC GTCCAGTTCC GCGTCGCGAA CGCGCGCCTC ACGCTGCTGT CGATCGTGTC GGGCGCGCTG TGGGTCTGCG TGACGCTCGT CGTCGCGATG TGGCTCGGCT CGGTGCTCGA GGAGCGGCTG ATGCGCTCGC GCTCGCTCGA CGCGAACCTG CGGGTCGTGC TCGCGCGCGT CGGCCGTGCG CTCCTCATCT TCGCGGCGGT GCTGATCGGG CTGTCGCTCG TCGGCATCGA CGTGACCGTG CTCGGCGTGT TCGGCGGCGC GCTCGGCGTC GGGCTCGGCT TCGGCCTGCA GAAAATTGCG AGCAACTATG TGTCGGGCTT CATCATCCTG CTCGACCGCT CGCTGCGGCT CGGCGACGCG ATCAACGTGG GCGGCCTGCA GGGCGTCGTC ACGCAGATCC GCACGCGCTA CACGGTCGTG CGCGGCCTCG ACGGCAACGA GACGCTGATT CCGAACGAGA AGCTCATCAC CGACGTCGTG CAGAACCAGT CGTCGTACCT GACGCGCGGC TACGCGAAGG TCGCGGTTCA GGTCGCGTAC ACGTCGGACG TCGAGCGCGC GATGGCGCTG CTCGCCGACG CGGCGAAGGG CGTCGAGCGC GTGCTCGAGG ATCCGGCGCC CACGCCTTAT CTCGTCGGCT TCGGCGCGGA CGGCATCGAT CTCGAGCTCG GCTTCTGGAT CGCCGACGCG GCGAAGGGGA CGGCCGGCGT GCGCTCGACG GTCAACCGCA ACATCTGGCG GCTTTTTGTC GCACACGGGA TCTCGATTCC GTTCCCGCAG CGGGAGGTGC GCGTGATCGG GCTGCCCGAC GGCATCGCGC CCGCGGCCGG CGCAGCCGGC CCGGCGGCGG GGCGGCAGCC GCAGGACGCC TAG
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Protein sequence | MMTNHLTRRL AAVAHDFGQP AMIWQAVAFF GSLALAWLLA RHLRGRIDAR RRAAGRTPGP GALSLNRALF PLIGGVFMWL AETTFDELMP TSLLQLALVP LFGIGLIYIL FFVARRVFAR DGHTHAWLSI VEKLVSIVVW IAMALTVLGI QRDVLGWLDS VQFRVANARL TLLSIVSGAL WVCVTLVVAM WLGSVLEERL MRSRSLDANL RVVLARVGRA LLIFAAVLIG LSLVGIDVTV LGVFGGALGV GLGFGLQKIA SNYVSGFIIL LDRSLRLGDA INVGGLQGVV TQIRTRYTVV RGLDGNETLI PNEKLITDVV QNQSSYLTRG YAKVAVQVAY TSDVERAMAL LADAAKGVER VLEDPAPTPY LVGFGADGID LELGFWIADA AKGTAGVRST VNRNIWRLFV AHGISIPFPQ REVRVIGLPD GIAPAAGAAG PAAGRQPQDA
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