Gene BURPS1106A_0555 details

Gene Information

• Locus tag: BURPS1106A_0555
• Symbol: nagE
• ID: 4899738
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 524319
• End bp: 526079
• Gene Length: 1761 bp
• Protein Length: 586 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640133785
• Product: PTS system, N-acetylglucosamine-specific IIBC component
• Protein accession: YP_001064838
• Protein GI: 126452617
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; [COG1264] Phosphotransferase system IIB components
• TIGRFAM ID: [TIGR00826] PTS system, glucose-like IIB component; [TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.723185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGAA ATCCGTTTCT GAAAATACAG AGCCTCGGCA GGGCGCTGAT GCTGCCGATC 
GCGGTGCTGC CGGTGGCGGG CATCCTGCTG CGCCTCGGGC AGCAGGACGT GCTCAACATC 
AAGATGATCG CCGACGCGGG CGGCGCGATC TTCGAGAACC TGCCGCTGCT GTTCGCGATC 
GGCGTCGCGG TCGGCTTCGC GAAGGACAAC AACGGCGTGG CGGCGCTCGC GGGCGCGATC 
GGCTATCTGA TCGAAGTCGC GATCATGAAG GACATCGATC CGAAGCTGAA CATGGGCGTG 
CTGTCCGGGA TCATCGCGGG CGTCGTCGCG GGGCTGCTGT ACAACCGCTA CAAGGACATC 
AAGCTGCCCG ACTACCTCGC GTTCTTCGGC GGCAAGCGCT TCGTGCCGAT CATCACGGGG 
CTCGCGTGCG TCGTGCTCGG GATCGTGTTC GGCTACGTAT GGCAGCCGGT GCAGCACGCG 
ATCGACGCGG TCGGCCAGTG GCTGCTGACG GCGGGCGCGA TCGGCACGTT CGTCTACGGG 
TTCCTGAACC GCCTGCTGCT CGTCACGGGG CTGCACCACA TCATCAATTC GCTCGTCTGG 
TTCGTGTTCG GCACGTTCAC GCCGGCGGGC GGCGCCGCGG TGACGGGCGA TCTGCATCGC 
TTCTTCGCGG GCGATCCGAG CGCGGGCGGC TTCATGGCGG GCTTCTTCCC GATCATGATG 
TTCGGCCTGC CGGCCGCGTG CCTCGCGATG TTTCACGAGG CGCCGAAGGC GCGCCGCGCG 
ATCGTCGGCG GCCTGCTGTT CTCGATGGCG CTCACCTCGT TCCTGACGGG CGTGACCGAG 
CCGATCGAGT TCAGCTTCAT GTTCCTCGCG CCGGTGCTGT ACGTGATCCA CGCGGTGCTC 
ACGGGCCTTT CGCTCGCGAT CTGCCAGTTG CTCGGCGTGA AGCTCGGCTT CACGTTCTCG 
GCGGGCGCGA TCGACTATGT GCTGAACTAC GGGCTGTCGA CGAAGGGCTG GATCGCGATC 
CCGCTCGGCC TTGCGTACGG TCTCGCCTAC TACGGCCTCT TCCGCTTCTT CATCCGCAAG 
TTCAACATGG CGACGCCGGG CCGCGAGCCC GCGGGCGCGG ACGCGCAGGC GCAGTCGTTC 
GCGTCGGGCG GTTTCGTCGC GCCGACGGCG GGCGCATCGG TGCCGCGCGC GCAGCGCTAC 
ATCGCGGCGC TCGGCGGCGC GGCGAACCTG TCGGTCGTCG ATGCGTGCAC GACGCGGCTG 
CGTCTTTCCG TCGTCGATCC CGAGAAGGTG TCCGAAGCGG ATCTGCGCAC GATCGGCGCG 
CGCGGCGTGC TCAAACGCGG CGGCAGCAGC GTGCAGGTGA TCATCGGGCC GGAGGCGGAC 
CTCATCGCCG ATGAGATTCG CGCGACGCTC GGCAGCGGCG CGGCGGCGCC CGCGGCTGCG 
GCTGCCGCGG CGCCTGCGGC GGCGGCAACG GCGGCGGGCG CGCAGTCGGG CCCGCTCGAT 
CCGGAGCCGA CGCGCTGGCT CGCGGTGTTC GGCGGCGCGA CGAACGTCGC TTCGCTCGAC 
GCGGTCGCGG CGACGCGCCT GCGCGTCGTC GTGCGCGATC CGTCGGCGGT CGATCGCCAG 
CGCCTCGCGA CGCTTGACGT CGCCTGGGTC GCGAGCGACA CGTTCCATAT CGTCTGCGGC 
CAGTCGGCGC CGCGCTATGC GCAGCAGCTC GCCGCGCGCC TGCCGTCGTC CGACGGCGGC 
ACGGCGGCCC AGCCCGCCTG A 

 

Protein sequence

MDGNPFLKIQ SLGRALMLPI AVLPVAGILL RLGQQDVLNI KMIADAGGAI FENLPLLFAI 
GVAVGFAKDN NGVAALAGAI GYLIEVAIMK DIDPKLNMGV LSGIIAGVVA GLLYNRYKDI 
KLPDYLAFFG GKRFVPIITG LACVVLGIVF GYVWQPVQHA IDAVGQWLLT AGAIGTFVYG 
FLNRLLLVTG LHHIINSLVW FVFGTFTPAG GAAVTGDLHR FFAGDPSAGG FMAGFFPIMM 
FGLPAACLAM FHEAPKARRA IVGGLLFSMA LTSFLTGVTE PIEFSFMFLA PVLYVIHAVL 
TGLSLAICQL LGVKLGFTFS AGAIDYVLNY GLSTKGWIAI PLGLAYGLAY YGLFRFFIRK 
FNMATPGREP AGADAQAQSF ASGGFVAPTA GASVPRAQRY IAALGGAANL SVVDACTTRL 
RLSVVDPEKV SEADLRTIGA RGVLKRGGSS VQVIIGPEAD LIADEIRATL GSGAAAPAAA 
AAAAPAAAAT AAGAQSGPLD PEPTRWLAVF GGATNVASLD AVAATRLRVV VRDPSAVDRQ 
RLATLDVAWV ASDTFHIVCG QSAPRYAQQL AARLPSSDGG TAAQPA