Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0529 |
Symbol | |
ID | 4900426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 494540 |
End bp | 495733 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640133759 |
Product | major facilitator transporter |
Protein accession | YP_001064812 |
Protein GI | 126452312 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.318385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAACCA ACACGCTACG CTTTGCATTC TTCATGTGCG GCTGCGCGGC TTTTCTCGGC CTGTACGCGA CGCAGGGCAT CCTGCCCCAG ATCGCGGCCA CGTTCGGCAC GCGCATCGAA CAGGCCGCAC TCGGCATTAC GGCCACGACG GTTGCGATGG CGGCGACGGC GCCGTTCGTC GGCATGCTGA CGCGCCGCCT GGAACGGCGC CGGATCATCA CGCTCGCCGC GCTGCTGCTC GCGGCGCCGA TGCTCTGGAC CGCGCACGCG GATTCGTTCG CCGAATTCCT CGCGGGACGG ATCGCGATGG GAGTCGTCAT TCCGGTGCTG TTCGCCGTCA CGGTGTCGTA CATCGGCGAA ACCTGGCAGG ACAGCACAGC CACCGAGATG ACGAGCTTCT TCATCGCCGG CACGACGCTC GGCGGCTTCG GCGGACGCTT CATCGTCAAC GGCGTGACGG CGATGAGCGG CTGGCCGCGC GCGCTCGACG TGCTCGCGTG CGCGATGCTC GCCGCGGGCG TCGCGATCCG GCTGTGCCTG CCGCGCACGC GCGCGGCGGC GACGGCGGCA GCCCCGGCGG CGATGTCGCT GCGCGCGCTC GGCCGCAACC GGCCGGTGCT CGCGTCGTAT TTCATCGGCG CGTGCATCCT GTTCTCGCAG GTCACGACGT TCACGTACGT CGGGCTGTAT CTCGCGAAGC CGCCGTATCG GTTCGGCACC GCGGCGATCG GCTCGATCTA TGCGGTCTTC CTGCTCGCCG TCGTGGTCAC GCCGATGGCC GCACGGCTGT CGCGCAGGCG CCCGCCCGCG GATCTGCTCG CGCTCGCGGC CGGGCTCGGC GTGGCGGGCG CGCTGCTCAC GCTTCATGCC GATGTGCGCG TGATCCTGCT CGGGCTCGCC ATCGGCTCGA CGGGCGTGTT CGTGGGCCAG GCGGCCGCGA GCGCGTTCGT CACCCGTTCG ACCGCCGAGG GCCGGACATT CGCAGTGGGG CTTTATCTGT CGTTCTACTA TCTGGGCGGC AGCGCGGGAA CGGTATTGCC GGTTCCGGCA TGGCAGCGCT TCGGCTGGGC GGGCTGCGTC GCACTCGTCG TGTGCGCGCA CCTGCTCGCC GCCATCGCCG CTTGCACGTT CTGGAAACCG GGCGGCATCG ACGCAACACG CACTCGACCA TCATCCATCA CGACATCGCG CTAG
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Protein sequence | MVTNTLRFAF FMCGCAAFLG LYATQGILPQ IAATFGTRIE QAALGITATT VAMAATAPFV GMLTRRLERR RIITLAALLL AAPMLWTAHA DSFAEFLAGR IAMGVVIPVL FAVTVSYIGE TWQDSTATEM TSFFIAGTTL GGFGGRFIVN GVTAMSGWPR ALDVLACAML AAGVAIRLCL PRTRAAATAA APAAMSLRAL GRNRPVLASY FIGACILFSQ VTTFTYVGLY LAKPPYRFGT AAIGSIYAVF LLAVVVTPMA ARLSRRRPPA DLLALAAGLG VAGALLTLHA DVRVILLGLA IGSTGVFVGQ AAASAFVTRS TAEGRTFAVG LYLSFYYLGG SAGTVLPVPA WQRFGWAGCV ALVVCAHLLA AIAACTFWKP GGIDATRTRP SSITTSR
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