| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0259 |
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| Symbol | dppD |
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| ID | 4900536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 242053 |
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| End bp | 243045 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640133489 |
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| Product | dipeptide ABC transporter, ATP-binding protein DppD |
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| Protein accession | YP_001064542 |
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| Protein GI | 126453266 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TATTGACCAT CCGCAATCTC GCGGTGAACT TCAGCGGGCT GCCCGCGGTC
GACAGGATCA ACCTGTCCAT CGCGCGCGGC GAAGTGGTCG GCGTGGTGGG CGAGTCCGGC
TCGGGCAAGA GCGTGACGAT GATGGCGCTG ATGGGCCTGA TCGACGCGCC CGGCATCGTC
ACCGCCGACG AAGTCACGTT CGACGGCGTC GATCTGCTCA AGGCGAGCGC GAAGGCGCGC
CGCCGCATCA TCGGCAAGGA CGTCGCGATG GTGTTCCAGG ATGCGCTGAC GAGCCTGAAC
CCGAGCTACA CGGTCGGCTA TCAGATCAAG GAGGTGCTGA AGCTGCACGA GGGCCTGCGC
GGCGACGCGC TGAACAAGCG CGCGCTCGAA CTGCTCGATC AGGTCGGGAT TCCCGATGCG
AGGAACCGCA TCGGCACGTT TCCGCACCAG ATGTCGGGCG GCATGAACCA GCGCGTGATG
ATCGCGATGG CGGTGGCGTG CAACCCGAAG CTCCTGATCG CCGACGAGCC GACGACCGCG
CTCGACGTGA CGATCCAGGC GCAGATCATG GATCTGCTCG TCACGCTGCA GAAGGAGCGC
GGAATGGCGC TCGTGCTGAT CTCGCACGAT CTCGCGGTGG TCTCGGAAGT CGCGCAGCGC
GTCGCGGTGA TGTACGCGGG CGAGATCATC GAGACGAACC GCGTGCCGGA CATCTTCGCG
CATCCGCATC ATCCGTACAC CGAAGCGTTG CTCGCGGCGA TTCCGGAGCA CAATGCGGGC
GCGAAGCGGC TCGCCGCGCT GCCGGGGATG GTGCCGGGCC GCGACGACCG GCCGAGCGGG
TGCCTGTTCG CGCCGCGCTG CAAGTACGTC GTCGACGACT GCATGAAGGC GCGGCCTACG
CTCGCCGAGC TCGCGCCGGG CACCGGCATG CGCGCGCGCT GCATCAAGCC CCTCAACCTG
GAAGCGCCGC ACACGCAAGG AGGCGCGCGA TGA
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| Protein sequence | MSDLLTIRNL AVNFSGLPAV DRINLSIARG EVVGVVGESG SGKSVTMMAL MGLIDAPGIV
TADEVTFDGV DLLKASAKAR RRIIGKDVAM VFQDALTSLN PSYTVGYQIK EVLKLHEGLR
GDALNKRALE LLDQVGIPDA RNRIGTFPHQ MSGGMNQRVM IAMAVACNPK LLIADEPTTA
LDVTIQAQIM DLLVTLQKER GMALVLISHD LAVVSEVAQR VAVMYAGEII ETNRVPDIFA
HPHHPYTEAL LAAIPEHNAG AKRLAALPGM VPGRDDRPSG CLFAPRCKYV VDDCMKARPT
LAELAPGTGM RARCIKPLNL EAPHTQGGAR
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