Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0159 |
Symbol | def |
ID | 4899509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 151300 |
End bp | 151839 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640133389 |
Product | polypeptide deformylase |
Protein accession | YP_001064443 |
Protein GI | 126453149 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.407364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAGCGG GTCGTTCGTC TCCCGACACT GAAATCATGG CTTTGCTGAA CATTCTTCAC TACCCCGATA AACGGCTGCA CAAGGTGGCC AAGCCGGTCG CCAAAGTGGA CGACCGCATT CGCAAGCTCG TCGCCGACAT GGCCGAGACG ATGTACGCGG CGCCCGGCAT CGGCCTTGCT GCGACGCAGG TCGACGTGCA TGAACGCGTG ATCGTGATCG ACGTGTCCGA GGACAAGAAC GAGCTGCGCG TCTTCATCAA CCCGGAAATC GTCTGGACGG GCGACGGCAA GCAGGTCTAT GAGGAAGGCT GCCTGTCGGT GCCGGGTGTC TATGACGAAG TGGAGCGCCC GGACCGGGTG CGCGTGCGCG CGCTCGACGG CCAAGGCGAG CCGTTCGAGC TCGATTGCGA AGGGCTGCTC GCGGTGTGCA TCCAGCACGA GATGGATCAC CTGATGGGTC GCGTGTTCGT CCAGTATCTG TCGCCGCTCA AGCAGACCCG GATCAAGACG AAGATGAAGA AACTCGAACG CGCAATGTGA
|
Protein sequence | MRAGRSSPDT EIMALLNILH YPDKRLHKVA KPVAKVDDRI RKLVADMAET MYAAPGIGLA ATQVDVHERV IVIDVSEDKN ELRVFINPEI VWTGDGKQVY EEGCLSVPGV YDEVERPDRV RVRALDGQGE PFELDCEGLL AVCIQHEMDH LMGRVFVQYL SPLKQTRIKT KMKKLERAM
|
| |