Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0060 |
Symbol | |
ID | 4899606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 58384 |
End bp | 59181 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640133290 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_001064345 |
Protein GI | 126452583 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACGT TCAACGACAA GGTCGCGTTG ATCACGGGCG GCGGCACGGG CATCGGCGCG GCCGTCGCGC GCAAGTTCGT CGAAGCGGGC GGCAGGGTCG TGCTGCTCGG CCGCCGTCGC GAGCCGCTCG ACGCGGTCGC GAAGCCGCTC GGCGCCGCCG CGATCGCGGT CGCGGGCGAC GCGGCCGATG CGCATGACGT GCGCCGCGCG CTAGACGACG CGCGCGCGGC GTTCGGGCGC GTCGACGTGC TGGTCGCGAA CGCGGGCGGC CACGGCGTCG GCAGCGCGCT CGATACCGAC GACGCGTCGT GGGCGCAATC GACGCGCGTG AACCTCGACA CCGCGTTCGT CTGCGCGCGC GAGTTGCTGC CCGAGCTGAT CGAGCGGCGC GGCAGCATCG TGATCCTGTC GTCGCTCGCC GGCCATTTCG CGGGGCCGAA CGTCATCGGC TACGTGACGA CCAAGCACGC GCTGATCGGC CTCACACGCT CGCTCGCGCG CGACTACGGC CGTGCCGGCG TGCGCGTGAA CGCGGTGTGC CCGGGCTGGG TGCGCACCGC GATGGCCGAC GAGCAGATGG ACGCGCTGCG CGACGCGCAC GGGCTCGCGA CGCGCGAGGA CGCCTACCGG CTCGTCACGC GCGACGTGCC GCTCGGCCGC CCGGCGCAGC CCGACGAAGT CGCCGACACG GTGCTGTACC TGGCGTCGCC GTATGCATCG ATGGTCACGG GCACGTCGCT GCTCGTCGAC GGCGGCGCAT CCGCCGTCGA TCTGCCGACG ATCGAATTCG CGCGCTGA
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Protein sequence | MHTFNDKVAL ITGGGTGIGA AVARKFVEAG GRVVLLGRRR EPLDAVAKPL GAAAIAVAGD AADAHDVRRA LDDARAAFGR VDVLVANAGG HGVGSALDTD DASWAQSTRV NLDTAFVCAR ELLPELIERR GSIVILSSLA GHFAGPNVIG YVTTKHALIG LTRSLARDYG RAGVRVNAVC PGWVRTAMAD EQMDALRDAH GLATREDAYR LVTRDVPLGR PAQPDEVADT VLYLASPYAS MVTGTSLLVD GGASAVDLPT IEFAR
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