Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0049 |
Symbol | |
ID | 4901322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 47756 |
End bp | 48856 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640133279 |
Product | putative porin |
Protein accession | YP_001064334 |
Protein GI | 126454786 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT TTGCGGTAGC GGCGGCGGGC CTTGCCGTCG CGACGGGCGC GCACGCGTCC GACGGCAGCG TCACGCTGTT CGGCCTGATC GATGCCGGCG TGTCGTACGT GTCGAACGAA GGCGGCAAGC GCAACGTGTA TTTCGACGAC GGCATCGCGG TGCCGAATCT ATGGGGGCTT CGGGGCACCG AGGATCTCGG CGGCGGCGCG AAGGCGATCT TCGAGCTGAC GTCGCAATAC GCGCTCGGCA ACGGCGCCGC GCTGCCGACG CCGGGCTCGA TGTTCTCGCG CACCGCGCTC GTCGGCCTCT GGAGCGAGCG GCTCGGCAGC GTGACGCTCG GCCAGCAATA CGACTTCATG ACCGATTCGC TGACGTTCGG CTCGTTCGAC GGTGCGTTCC GCTACGGCGG TCTGTACAAC TTCCGCCAGG GGCCGTTCTC GAAGCTTGGG ATTCCCGACA ATCCCACCGG CTCGTTCGAC TTCGACCGGT TGGCGGGTTC GAGCCGCGTG CCGAACTCGG TCAAGTACAC GAGCGCGAAC CTGAACGGGC TCGTGTTCGG CCTGATGTAC GGTTTCGGCA ATCAGGCGGG CGGCGGGCTC GCGGCGAACA GCACCGTCAG CGCCGGCCTC AAGTACGAGA CGGGCAGTTT CGCGCTCGGC GCCGCCTATG TCGAAGTCAA GTATCCGCAG ATGAACAACG GGCACGACGG GCTGCGCAAC TGGGGGCTCG GCGCGCGTTA TGCACTGTCC GCGTTCGATC TGAACCTGCT GTACACGAAC ACGCGCAACA CGCTGACGGG CGCGGCGATC GACGTGATCC AGGCCGGCGT GCGCTACGTC GGCGCGCCGT GGACGATCGG CGCGAACTAC GAGTACATGA AGGGCAACGC GCAGCTCGAT CGCAACTACG CGCATCAAGT CACGGCGGCC GCGCAGTATG CGCTGTCCAA GCGCACGTCC GCATACGTCG AGACCGTGTA CCAGTACGCG GGCGGCAGCG CGGGCGCGCA TGCGTGGATC AACGGCGTGA TGGGGCCCGA TGCGCAGTCG AGCTCGCGTT CGCAGTTTCT CGCGCGAATC GGCATGCTTA CCCGTTTCTG A
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Protein sequence | MKKFAVAAAG LAVATGAHAS DGSVTLFGLI DAGVSYVSNE GGKRNVYFDD GIAVPNLWGL RGTEDLGGGA KAIFELTSQY ALGNGAALPT PGSMFSRTAL VGLWSERLGS VTLGQQYDFM TDSLTFGSFD GAFRYGGLYN FRQGPFSKLG IPDNPTGSFD FDRLAGSSRV PNSVKYTSAN LNGLVFGLMY GFGNQAGGGL AANSTVSAGL KYETGSFALG AAYVEVKYPQ MNNGHDGLRN WGLGARYALS AFDLNLLYTN TRNTLTGAAI DVIQAGVRYV GAPWTIGANY EYMKGNAQLD RNYAHQVTAA AQYALSKRTS AYVETVYQYA GGSAGAHAWI NGVMGPDAQS SSRSQFLARI GMLTRF
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